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Protein Overview: gi|24375861, gi|...

General Information:
Name(s) found: gi|24375861 [NCBI NR]
gi|24350825 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24375861|ref|NP_719904.1| 3-oxoacyl-(acyl carrier protein) synthase I [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350825|gb|AAN57348.1|AE015871_8 3-oxoacyl-(acyl-carrier-protein) synthase II, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 405 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fatty acid biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 3-oxoacyl-[acyl-carrier-protein] synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNRVAITQI GLCTPLGQTP EQVLARLIAG DTSAMQTSDS LLFGQSTLVA PVTESLPTIP  60
   61 AALTQFDCRN NQLLLAAALQ ITDTVELAKQ TYGADRIGVV LGTSTSGIAK GELALAYRNQ 120
  121 HGHFPADYHY FQQELGSTSD FLRQLFELQG PSYTISTACS SSAKVFASAK RLLEAKLCDM 180
  181 VIVGGIDSLC QLTVNGFHAL ESVSKGHCNP FSANRDGINI GEGAALFTLT LATDNTANEA 240
  241 CVLLAGIGES SDAHHMSAPH PEGAGAIAAM KAALRDAQIS AQDIDYINLH GTATPKNDAM 300
  301 ESRAVLSVFG DTPPPASSTK PLVGHTLGAA GAIEAAFCYL LLSQHNHSFA LPPHRFDGQQ 360
  361 DPQDPSIALV APMQCAEHGK LNYVMSNSFA FGGSNASLIF CRKGA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..405] PSI-BLAST 123.0 Beta-ketoacyl-ACP synthase II

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity, transferring acyl groups
    		•  4.09204107606289 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  3.79121338118181 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] synthase activity
    		•  3.71249191203055 bayes_pls_golite062009
  • C-acyltransferase activity
    		•  3.27532895419051 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  3.14957464437124 bayes_pls_golite062009
  • acyltransferase activity
    		•  3.06879684191353 bayes_pls_golite062009
  • transferase activity
    		•  2.15834234036431 bayes_pls_golite062009
  • catalytic activity
    		•  2.14505178497871 bayes_pls_golite062009
  • acetyl-CoA C-acyltransferase activity
    		•  2.06897329929762 bayes_pls_golite062009
  • acetyl-CoA C-acetyltransferase activity
    		•  1.50839304016514 bayes_pls_golite062009
  • C-acetyltransferase activity
    		•  1.19264084089277 bayes_pls_golite062009
  • transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
    		•  0.5334204157422 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.45

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle