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Protein Overview: gi|24375854, gi|...

General Information:
Name(s) found: gi|24375854 [NCBI NR]
gi|24350818 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375854|ref|NP_719897.1| glycosyl transferase, group 2 family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350818|gb|AAN57341.1|AE015871_1 glycosyl transferase, group 2 family protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 594 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: polysaccharide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: transferase activity, transferring glycosyl groups [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPVPIKLAL VIPNYNHSAA ISQALSELAA LNLPCYLIDD GSNDETRYLL QSLAEQHDWV  60
   61 TLLQHPYNRG KGAAVMTGLR SAYRDGFTHA LQVDADGQHN LSDIPAMLAK AQAKPDALIS 120
  121 GKPEYDKSVP KGRLYGRYLT HFWVWVETLS FDIQDSMCGF RVYPLAATER LFSKQALTER 180
  181 MDFDIEILVK LYWQGVEILF HPTKVIYPEN GVSHFQCVAD NVRISKLHTR LFFGMLKRLP 240
  241 QLLRRKQAAK STSSAHTATH WSAMKERGSY WGIKLLVESY RFGGHWLCRA IMYPVICYFF 300
  301 LTGKVSREAS RDFLRRVQHL EPQHPQLNQP VGWRDSLNHF IAFGNAALDR IDAWCDRIQL 360
  361 SQVDFPDRQV LADQLESGKG AVLLVSHLGN LELCRAISIH QRKVKVNVMV LTSHAENFNN 420
  421 VLKQLNPNSS LNLIQVTELN PATSMLLQQK IEDGELVVIA GDRTSSHAQG RVVYAPFMGQ 480
  481 DAAFPQGPFI LAGLLDCPVY LMFCLREQGR YRVHLERFAE TLKGPRAGRM ERLQQAVYRY 540
  541 SERLEHYARR EPLQWFNFFD FWRDDNQVNR ATSAHKTTAA LPEQERTTDR TEHL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..322] PSI-BLAST 22.69897 The Crystal Structure of UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferase-T1
    2 View Details [323..594] FFAS03 1.97 Glycerol-3-phosphate (1)-acyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity, transferring hexosyl groups
    		•  2.1118093316982 bayes_pls_golite062009
  • catalytic activity
    		•  1.88676710996045 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  1.67503629152615 bayes_pls_golite062009
  • transferase activity
    		•  1.39859835180302 bayes_pls_golite062009
  • cytidylyltransferase activity
    		•  1.14240569193314 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.897978517422275 bayes_pls_golite062009
  • acetylgalactosaminyltransferase activity
    		•  0.644929907025935 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.611019346919185 bayes_pls_golite062009
  • UDP-N-acetylglucosamine diphosphorylase activity
    		•  0.412018910498896 bayes_pls_golite062009
  • polypeptide N-acetylgalactosaminyltransferase activity
    		•  0.340417285792894 bayes_pls_golite062009
  • uridylyltransferase activity
    		•  0.321928989676507 bayes_pls_golite062009
  • mannose-phosphate guanylyltransferase activity
    		•  0.2363835251362 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.14266785040628 bayes_pls_golite062009
  • guanylyltransferase activity
    		•  0.0539392112504681 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle