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Protein Overview: gi|24375816, gi|...

General Information:
Name(s) found: gi|24375816 [NCBI NR]
gi|24350770 [NCBI NR]
Description(s) found:
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  • gi|24375816|ref|NP_719859.1| phosphatidylglycerophosphatase B, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350770|gb|AAN57303.1|AE015867_2 phosphatidylglycerophosphatase B, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • phosphatidylglycerophosphatase B, putative [Shewanella oneidensis MR-1]gi|24350770|gb|AAN57303.1| phosphatidylglycerophosphatase B, putative [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • phosphatidylglycerophosphatase B, putative [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 260 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phospholipid catabolic process [ISSLink to PubMed article]
    Molecular Function: phosphatidylglycerophosphatase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHPAYLLRR LALVWLLLAT IPSLLLLTQN QLFPLIDLQS PLATALYWLT TTGTAPYGVV  60
   61 TVLVVLALAY RYMPKALFIN LFLAISLSQV LSLSTSHALK SFFKEPRPNL VYLAEQALPE 120
  121 EAQLTPDTFY QLAHSDRSRV IAEALTELQT RPSGLTLTPN IKQHWEDEIG YSFPSGHTIF 180
  181 AVTLVLTASY YLLLAGLPIF TSALLAWGLL MGLSRMLLGM HWPQDVLFST LLAAIISSLS 240
  241 IFLVSKIRIF TQAFVKASSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] MSA 5.764997 View MSA. No confident structure predictions are available.
    2 View Details [119..260] PSI-BLAST 17.221849 Bacterial acid phosphatase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.13806785143726 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  1.03116052555812 bayes_pls_golite062009
  • hydrolase activity
    		•  0.257680585858544 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle