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Protein Overview: gi|24375791, gi|...

General Information:
Name(s) found: gi|24375791 [NCBI NR]
gi|24350739 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375791|ref|NP_719834.1| diaminopimelate decarboxylase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350739|gb|AAN57278.1|AE015863_7 diaminopimelate decarboxylase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 414 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lysine biosynthetic process via diaminopimelate [ISSLink to PubMed article]
    Molecular Function: diaminopimelate decarboxylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHFLYQDNT LYAEGCRVND LAQTYGTPLY IYSRATLERH WHAFNNAVAG HPHLVCYAVK  60
   61 ANSNLAVLNV LARLGSGFDI VSGGELARVI EAGGDPAKVV FSGVGKTVAE MEQALNLGIY 120
  121 CFNVESSAEL EQLNLVAGRL GKVAPVSLRV NPDVDAGTHP YISTGLKENK FGIAMDEAEA 180
  181 VFARAHALPH LQVKGVDCHI GSQLTEIQPF LDAMDRMLSL IDRLAEQGIV IEHFDVGGGL 240
  241 GVTYDDETPP HPDVYAAALL KRLGHRKLKL IFEPGRAIAA NAGIFVTEVL YLKENSDKRF 300
  301 AIVDGAMNDL IRPALYSAWQ KIIPVTPRDD QAHVFDIVGP VCETGDFLGK DREFAIAPGD 360
  361 LLVVRSSGAY GFAMASNYNT RPRAAEVMVD GDKAYLVRER EKLPQLWQGE QLLP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..414] PSI-BLAST 97.522879 No description for 2p3eA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle