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Protein Overview: gi|24350642, gi|...

General Information:
Name(s) found: gi|24375708 [NCBI NR]
gi|24350642 [NCBI NR]
Description(s) found:
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  • gi|24375708|ref|NP_719751.1| UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350642|gb|AAN57195.1|AE015855_6 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase [Shewanella oneidensis MR-1] [NCBI NR]
  • UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase [Shewanella oneidensis MR-1]gi|24350642|gb|AAN57195.1| UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 460 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: acid-amino acid ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPISLKALS QHLGAHRVGD DVTVQALSSD SRKIGPATLF VALKGDRFDG HDFAATAIEN  60
   61 GAIALLVERE LAFDIPQLIV ADCQKAMGAI GAYVRDQVNP ICVALTGSNG KTSVKEMIAT 120
  121 ILSAKHQVLY TAGNFNNEIG VPLTLLRLTP EDKYGVFELG ANHKGEIDYT SGLVRPHVAL 180
  181 VNNVGSAHLE GFGSQAGVAQ AKSEIYNHLQ EDGTAIINAD DAFADVMRVK AKHYKQLSFS 240
  241 QQEGAAKRQI DVIATGHKAN SDGCYRFMLN YAGESCEVVL PLAGRHQVSN ALAAASVCIA 300
  301 LGLNLTEIAE GLSQLTPVKG RMQPTQLGRV RLIDDSYNAN PVSVGAAIAW LKEISENRCL 360
  361 VLGDLGELGD NAPLLHAELG QLARQQGIDA LFCTGTLTQH TSHAFGAEHH DSVATLVEKL 420
  421 IKHINQLPGQ VTVLVKGSRS AAMERVVDGL TVAFGRGELV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..460] PSI-BLAST 82.522879 UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle