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Protein Overview: LPXC_SHEON

General Information:
Name(s) found: LPXC_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Shewanella oneidensis (strain MR-1) GN=lpxC PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 306 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipid A biosynthetic process [ISSLink to PubMed article]
    Molecular Function: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFQRTVQKM VKATGVGLHS GNKVTLSIMP APVNTGIVLV RTDMSPAVAI PAKAEQVRET  60
   61 TMCTALVNDE GIRISTIEHL FAALAGLGID NAVIEVDAPE IPIMDGSASP FVFLLQSAGI 120
  121 KEQSAPKKYL KIKRPVRVED GDKWAELKPF KGFRVNFKID FAHPEIARSQ QHVVMDFSTS 180
  181 AFVKDISRAR TFGFMRDIEY LRANNLALGG SMENAVVLDE YRVLNPDGLR YEDEFVKHKI 240
  241 LDAFGDLYVA GHAILGEFTA YKTGHALNNQ LVRALLAQQD AWELVSFEKE ADAPVSFTVP 300
  301 GGVVFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..306] PSI-BLAST 85.39794 RDC refined solution structure of the AaLpxC/TU-514 complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
    		•  3.46483388226683 bayes_pls_golite062009
  • catalytic activity
    		•  1.24889475603062 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle