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Protein Overview: gi|24350538, gi|...

General Information:
Name(s) found: gi|24375632 [NCBI NR]
gi|24350538 [NCBI NR]
Description(s) found:
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  • gi|24375632|ref|NP_719675.1| toxin secretion ABC transporter protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350538|gb|AAN57119.1|AE015846_1 toxin secretion ABC transporter protein, HlyB family [Shewanella oneidensis MR-1] [NCBI NR]
  • toxin secretion ABC transporter protein, HlyB family [Shewanella oneidensis MR-1]gi|24350538|gb|AAN57119.1| toxin secretion ABC transporter protein, HlyB family [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • toxin secretion ABC transporter protein, HlyB family [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 549 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pathogenesis [ISSLink to PubMed article]
    Molecular Function: ATPase activity, coupled to transmembrane movement of substances [ISSLink to PubMed article]
    toxin transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIESLRLLAQ HKSFTELLLS STLINVLSLA LPFTMLQIYD RILPNEAYGT ASVLAIGVGI  60
   61 AILLELVLRY TRSWLLALNA SNYELQTTAQ FVDRLMKADY HHVEQLGSGK ILHGITSIAT 120
  121 MREIYSGQAA VALMDFPFVI IFLALVAYIG GPLVFIPILV WGIAGIGVWQ IGKKLSVATR 180
  181 ELAISDDERT RLLILVLSGL TTAKSLALES RITYAYKKIN YQRLAQQNEV DWLSSQLQEW 240
  241 IQGASQATTL ALVLIGCFEV LNGDLTTGGL AACSILAGRA VAPLSAIGSL KAKFVTAQSA 300
  301 MQDVNEIIAS PPESLNGTQV YQQKLPSGPI QFEQVSAQQT GAKLKQINLT IPAGSLVTVT 360
  361 SNPLTHASLL LSTVGGYHQV TEGAIKIDSI PLTEHDPLEY RQSISYVSPW ATLLAGSILD 420
  421 NLTLFRHERE AYAMVLADKL GLSATIAQLP AGYQTLVGNN DSQMLNKGAI KLIAIVRALA 480
  481 QSPSILLLDE PMVSLDADSQ QRLLALLLEL KNHITLIVAS YFTEIAAISD YRIHISSQGD 540
  541 ATMSSNGEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..549] PSI-BLAST 120.0 No description for 2hydA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  2.16348856338652 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.56557995183783 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.30484188503146 bayes_pls_golite062009
  • lipid transporter activity
    		•  0.71867095828459 bayes_pls_golite062009
  • binding
    		•  0.480644688089444 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.26128259627891 bayes_pls_golite062009
  • catalytic activity
    		•  0.195870175969239 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.18175860087446 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.17855967742408 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.16810258283338 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.16810258283338 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.16755234225609 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  0.0957699058789503 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  0.09182767935661 bayes_pls_golite062009
  • GTP binding
    		•  0.0819139864212004 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle