YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24350468, gi|...

General Information:
Name(s) found: gi|24375579 [NCBI NR]
gi|24350468 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24375579|ref|NP_719622.1| carbon-nitrogen family hydrolase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350468|gb|AAN57066.1|AE015840_2 hydrolase, carbon-nitrogen family [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 282 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [ISSLink to PubMed article]
    Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISLLQCQS SRDVSANLLF IESQLEELTQ ERQQWGDNSP HLVVLPECSL LFGGHESQQL  60
   61 AYAGDSHHSQ LKSALSALAT RYRVFMVAGT IPALAEGGRV YSRCYLFDDK GDTLGHYDKL 120
  121 HLFDVDVADG TKQYRESETF CPGDHISVID TPFGKIGLSI CYDLRFPDLF RAMRLAGAEI 180
  181 ITVPSAFTKV TGEAHWQVLL QARAIETQCF IVAAAQWGAH NQGSRETWGQ SMVIGPWGNI 240
  241 IAERKTGTGW VHADIDLTEV NSIRSKMPVM QHNRFNVPMI KR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..282] PSI-BLAST 63.221849 hypothetical protein yl85

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.64442398754697 bayes_pls_golite062009
  • hydrolase activity
    		•  1.04460236807872 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.472813950465394 bayes_pls_golite062009
  • binding
    		•  0.390566185852462 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle