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Protein Overview: gi|24350343, gi|...

General Information:
Name(s) found: gi|24375486 [NCBI NR]
gi|24350343 [NCBI NR]
Description(s) found:
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  • gi|24375486|ref|NP_719529.1| sensor histidine kinase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350343|gb|AAN56973.1|AE015830_8 sensor histidine kinase [Shewanella oneidensis MR-1] [NCBI NR]
  • sensor histidine kinase [Shewanella oneidensis MR-1]gi|24350343|gb|AAN56973.1| sensor histidine kinase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • sensor histidine kinase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: two-component signal transduction system (phosphorelay) [ISSLink to PubMed article]
    Molecular Function: two-component sensor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIYLKIIRGF FSALREHPQS QSIPVIFVSA LDETANQIQG LQGGAIDYLV KPVQPDILKL  60
   61 RLANLLATVN LQRDLQANYD NMLELSRLRD CVDELIHHDL KSPLSAISAM LQRLSQDKSC 120
  121 PKGWRSKLTA IHDLTMQSIN TVNLSSEIFK IETGRFILKP ERFSAHGLVK QVLHSMHVTF 180
  181 HHKQLIAFQF PDEDPNGQFD VLADETLTYS LLLNLIKNAF EASTMRTKVA IHLSIEQGNV 240
  241 VIQIENSGVV PEHIRPRFWD KYVTSQKEEG AGLGTYSACL LAKAQGGTTQ LQVDDLQNKT 300
  301 IVTVCLPAAT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] PSI-BLAST 5.69897 Response regulator PleD in complex with c-diGMP
    2 View Details [68..310] PSI-BLAST 37.221849 Structure of the entire cytoplasmic portion of a sensor histidine kinase protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle