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Protein Overview: gi|24350300, gi|...

General Information:
Name(s) found: gi|24375452 [NCBI NR]
gi|24350300 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375452|ref|NP_719495.1| phosphocarrier protein NPR [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350300|gb|AAN56939.1|AE015827_11 phosphocarrier protein NPR [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 91 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phosphoenolpyruvate-dependent sugar phosphotransferase system [ISSLink to PubMed article]
    regulation of nitrogen utilization [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKLERQVTI CNKLGLHARA ATKLVVLASE FDASITLIQG EKQASAASVL GLLMLETGMG  60
   61 KTITLIAEGP DAEPALNAIC ALIDAKFDEA S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] PSI-BLAST 25.30103 crystal structure of transcriptional regulator-phosphoprotein-DNA complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
    		•  5.70778264466435 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  4.7398246519874 bayes_pls_golite062009
  • transporter activity
    		•  1.94557075462337 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.8285077384404 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.73790085561506 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.57976971135135 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.4723961195197 bayes_pls_golite062009
  • catalytic activity
    		•  1.16445344378552 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.97685688328333 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.61783246115451 bayes_pls_golite062009
  • binding
    		•  0.569728786489819 bayes_pls_golite062009
  • transferase activity
    		•  0.08533057053308 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle