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Protein Overview: HEM1_SHEON

General Information:
Name(s) found: HEM1_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Glutamyl-tRNA reductase OS=Shewanella oneidensis (strain MR-1) GN=hemA PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 416 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: porphyrin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: glutamyl-tRNA reductase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVAIGINH KTATVDLREK VAFSPDKIHD AMKSLASRTR SGEAVIVSTC NRTELYCNNG  60
   61 DETDIIEWLE EYHGLEHQDV APCLYNYHGQ EAVRHLMRVA SGLDSLILGE PQILGQVKQA 120
  121 FVKAKEAGTV ALTIDRLFQN TFSVAKKVRT ETEIGAAAVS VAFAAVSMAK HIFSSLSTTK 180
  181 VLLIGAGETI ELVAKHLKDN GVASMVVANR TLERAQSMCE EFNATAITLA QIPDFLPKAD 240
  241 IVISSTASPL PILGKGMVEK ALKQRRHQPM LLVDIAVPRD IEPEVADLDD AFLYTVDDLH 300
  301 SIIEQNKASR KEAAEQAELI TEEQSHLFME WVRSLESVDS IREYRSQSMA IKDELVERAL 360
  361 NKLAQGGDTE QVLVELANRL TNRLIHAPTQ ALTVASRQGD LNTLGQLRTA LGLDKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..416] PSI-BLAST 59.221849 Glutamyl tRNA-reductase dimerization domain; Glutamyl tRNA-reductase middle domain; Glutamyl tRNA-reductase catalytic, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.881088609158401 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle