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Protein Overview: gi|24375152, gi|...

General Information:
Name(s) found: gi|24375152 [NCBI NR]
gi|24349926 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375152|ref|NP_719195.1| octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349926|gb|AAN56639.1|AE015800_12 octaprenyl-diphosphate synthase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 323 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: menaquinone biosynthetic process [ISSLink to PubMed article]
    ubiquinone biosynthetic process [ISSLink to PubMed article]
    Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLNAIRQLA DTDMQAVNQL IYKQLESDVA LINQLGFYII NGGGKRLRPL LSVLAARAVD  60
   61 YQGEAHLKLA AIIEFIHTAS LLHDDVVDES TLRRGRETAN ALFGNSASVL VGDFLYTRSF 120
  121 QMMTELDSMR VLRVLADTTN VLAEGEVLQL MNCNDPDTTE ESYMRVIYCK TAKLFEAATL 180
  181 LAAVLAGASP EQETALGDYG KYLGTAFQLT DDLLDYTADS DELGKNIGDD LAEGKPTLPL 240
  241 IYAIAHGTEE EKQLIRQAIE QGDGTHAIEK IVAALHHCGA LNYTQQKAIE ESNKAIAALS 300
  301 VLPDSDFKTA LISLAKISVD RNH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..323] PSI-BLAST 82.045757 Crystal structure of geranylgeranyl pyrophosphate synthetase from Pyrococcus horikoshii Ot3


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle