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Protein Overview: gi|24349860, gi|...

General Information:
Name(s) found: gi|24375098 [NCBI NR]
gi|24349860 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375098|ref|NP_719141.1| cysteine synthase B [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349860|gb|AAN56585.1|AE015796_7 cysteine synthase B [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 288 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cysteine biosynthetic process from serine [ISSLink to PubMed article]
    Molecular Function: cysteine synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIEACIGQT PLVRLQRLDC GSSTVLLKLE GNNPAGSVKD RAALNMINQA ELRQEIAPGD  60
   61 TLIEATSGNT GIALAMAAAI KGYKMILIMP SNSTQERKDA MQAYGAELLL VDNMEAARDL 120
  121 ALALQAEGKG KVLDQFNNQD NANAHFLTTG PEIWQQSQGK ITHFVSSMGT TGTIMGVSKY 180
  181 LKSRNPDITI VGLQPADGSS IPGIRRWPQE YLPGIFDAAR VDLMMDIEEQ DAKAMARALA 240
  241 REEGICAGVS SGGAVYAALE LARQYPGSVV VAIVCDRGDR YLSSGLFS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..288] PSI-BLAST 77.69897 Crystal Structure

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cysteine synthase activity
    		•  5.18562032111987 bayes_pls_golite062009
  • catalytic activity
    		•  2.38994231321972 bayes_pls_golite062009
  • lyase activity
    		•  1.87743897464083 bayes_pls_golite062009
  • cystathionine beta-synthase activity
    		•  1.4517088142802 bayes_pls_golite062009
  • tryptophan synthase activity
    		•  1.04832999357666 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.923824749425553 bayes_pls_golite062009
  • threonine synthase activity
    		•  0.727838845253199 bayes_pls_golite062009
  • ammonia-lyase activity
    		•  0.476674617721478 bayes_pls_golite062009
  • L-threonine ammonia-lyase activity
    		•  0.37325071016009 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
    		•  0.249761226675912 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle