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Protein Overview: gi|24375007, gi|...

General Information:
Name(s) found: gi|24375007 [NCBI NR]
gi|24349742 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24375007|ref|NP_719050.1| glucose/galactose transporter [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349742|gb|AAN56494.1|AE015786_8 glucose/galactose transporter [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 435 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glucose transport [ISSLink to PubMed article]
    galactose transport [ISSLink to PubMed article]
    Molecular Function: galactose transmembrane transporter activity [ISSLink to PubMed article]
    glucose transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLDKSQQKS SFLPMAIVAA LFFILGFATW LNGSLMPYLK QILQLNPFQA SLILFSFYIA  60
   61 VTFTALPSAW VIRKVGYKNG MALGMGVMMI AGLLFIPAAK TQVFALFLFA QLVMGAGQTL 120
  121 LQTAVNPYVV RLGPEESAAA RVSVMGILNK GAGVIAPLVF SALILDSFKD RIGTTLTQVQ 180
  181 IDEMANGLVL PYLGMAVFIG ILALAVKKSP LPELSNEDEV ADHTDKSQIK AALSHPNLAL 240
  241 GVLALFVYVA VEVIAGDTIG TFALSLGIDH YGVMTSYTMV CMVLGYILGI LLIPRVISQP 300
  301 TALMISAILG LLLTLGILFG DNNSYAIANL LLVPFGGVAL PDTLLLIAFL GLANAIVWPA 360
  361 VWPLALSGMG KLTSTGSALL IMGIAGGAFG PVSWGLMSSA TDMGQQGGYM VMLPCYLFIL 420
  421 FYAVKGHKMR SWSAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..435] PSI-BLAST 23.0 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • carbohydrate transmembrane transporter activity
    		•  3.16484357749134 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.77541159976289 bayes_pls_golite062009
  • transporter activity
    		•  2.54286095434601 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.21878849047485 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.21878849047485 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.01247278444729 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  1.85936140095795 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.77039368764865 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  1.68455852928739 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.66673693200184 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  0.771603913181441 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  0.771603913181441 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.33203350453105 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.24475883286552 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.24475883286552 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.2309068592963 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.18188709249385 bayes_pls_golite062009
  • binding
    		•  0.105551689569449 bayes_pls_golite062009
  • glycerol-3-phosphate transmembrane transporter activity
    		•  1.26964387230144E-4 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle