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Protein Overview: gi|24349701, gi|...

General Information:
Name(s) found: gi|24374975 [NCBI NR]
gi|24349701 [NCBI NR]
Description(s) found:
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  • gi|24374975|ref|NP_719018.1| riboflavin biosynthesis protein RibD [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349701|gb|AAN56462.1|AE015783_5 riboflavin biosynthesis protein RibD [Shewanella oneidensis MR-1] [NCBI NR]
  • riboflavin biosynthesis protein RibD [Shewanella oneidensis MR-1]gi|24349701|gb|AAN56462.1| riboflavin biosynthesis protein RibD [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • riboflavin biosynthesis protein RibD [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 381 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: riboflavin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [ISSLink to PubMed article]
    diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWSVLDNQM MSRAIQLARK GFYTTRPNPS VGCVIVNDNQ IVGEGYHQKA GEPHAEVHAL  60
   61 RMAGELARGA TAYVTLEPCS HYGRTPPCAL ALINIGVKRV VVAVEDPNPQ VGGRGIQMLR 120
  121 DAGIQVDVGL HRDEAYALNL GFMKRMESGL PWVTVKLAAS LDGKTALSNG VSKWITGPEA 180
  181 RRDVQRLRLR SCALITGIET VLADDPSLNV RYSELGSLRA QLSESQVLQP LRVVLDSRAR 240
  241 MPITAALFAI ESPILLVSTV SYSSDFMVQL PAHVTCLQLP AIEGRISLSA LLSYLGKSCN 300
  301 QVLIEAGATL AGAFIGSGLA DELVLYQAMK ILGGQGRNLL ELPDYQMMAD IPTLKLVDER 360
  361 KVGADTRFTL RLESNPSLAN K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..381] PSI-BLAST 108.0 No description for 2g6vA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle