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Protein Overview: ISPD_SHEON

General Information:
Name(s) found: ISPD_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Shewanella oneidensis (strain MR-1) GN=ispD PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 249 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: isoprenoid biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIVLEATSQ TETQVAVQLE PLSSNVVAIV PAAGIGSRMG AGKPKQYLPL LGQSILAHTL  60
   61 DKLLSHPLIS QVIVALHPED ADFYALPQAK HPKLKTVIGG SERANSVLAA LDKAPDNSWA 120
  121 LVHDAARPCL MASDIDKLLT SRVQFPQGAI LAMPVRDTMK RANSLGEINS TVCRDNLWHA 180
  181 LTPQLFPTSL LRLHLQGALN AGAVVTDEAS AMEWAGISPG LVAGRADNIK VTHPDDLELA 240
  241 ELFLMRAKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..249] PSI-BLAST 35.221849 Crystal structure of 4-diphosphocytidyl-2C-methyl-D-erythritol synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
    		•  2.01680144494637 bayes_pls_golite062009
  • catalytic activity
    		•  1.88676710996045 bayes_pls_golite062009
  • transferase activity
    		•  1.47184463413038 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.03393419806381 bayes_pls_golite062009
  • cytidylyltransferase activity
    		•  0.983416157001861 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.651454753851031 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  0.423789091098118 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.361674579616957 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle