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Protein Overview: gi|24374923, gi|...

General Information:
Name(s) found: gi|24374923 [NCBI NR]
gi|24349632 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374923|ref|NP_718966.1| threonine synthase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349632|gb|AAN56410.1|AE015777_5 threonine synthase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 427 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: threonine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: threonine synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELYNLKHPS QTVSFKEAVQ LGLGKDRGLF FPTQIPVLHD IEALLAMPFV ERSKKVLGAW  60
   61 LASELGQDMV DQLVERAFNF DLPLVAVDEQ RACLELFHGP TLAFKDFGAR FMAQCINVFA 120
  121 QDSRLTILTA TSGDTGAAVA DAFYGLEKVN VVVLYPKGKI SELQEKMFTT LGKNIHTVAV 180
  181 ASDFDACQHL VKQAFEDSDV RDGLHLNSAN SINISRLLAQ ICYYFEAVAQ SKQRHEADPV 240
  241 IAVPSGNFGN LTAGLFAKAM GLPVKRFIAA TNANDTVPRY LDSGHWQPNP TQATMSNAMD 300
  301 VSEPSNWPRV EAICEKLGWP LADLVGICLS EAQTSEALVD LYAKGYVSEP HAAIAAKALT 360
  361 LNLVPDEVGI FLGTAHPAKF KDVVDRELAL NLPLPPELKA VAHKPILSAE LAADFAQLKA 420
  421 HLFAVLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..427] PSI-BLAST 93.0 Crystal Structure of Threonine Synthase from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • threonine synthase activity
    		•  3.59927532963055 bayes_pls_golite062009
  • carbon-oxygen lyase activity, acting on phosphates
    		•  2.61572425646119 bayes_pls_golite062009
  • catalytic activity
    		•  2.38994231321972 bayes_pls_golite062009
  • lyase activity
    		•  1.87743897464083 bayes_pls_golite062009
  • cysteine synthase activity
    		•  1.31641967296632 bayes_pls_golite062009
  • binding
    		•  1.19751827446411 bayes_pls_golite062009
  • tryptophan synthase activity
    		•  1.04832999357666 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.923824749425553 bayes_pls_golite062009
  • ammonia-lyase activity
    		•  0.476674617721478 bayes_pls_golite062009
  • L-threonine ammonia-lyase activity
    		•  0.37325071016009 bayes_pls_golite062009
  • protein binding
    		•  0.251404253093929 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
    		•  0.249761226675912 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle