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Protein Overview: gi|24374890, gi|...

General Information:
Name(s) found: gi|24374890 [NCBI NR]
gi|24349591 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374890|ref|NP_718933.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349591|gb|AAN56377.1|AE015774_12 cyclopropane-fatty-acyl-phospholipid synthase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 418 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipid biosynthetic process [ISSLink to PubMed article]
    Molecular Function: cyclopropane-fatty-acyl-phospholipid synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENTASQSSV VTAKLPDSLA RKLLLKALEN LPNGCLTIVE GDKSYRFGEH HSDLHATLVV  60
   61 KHPSFYRQVM LSGSIGAGEG YIQGYWSSPD LTKVVQLFAR NLPLLDQIEA KFSWLTGTIN 120
  121 RLKHLLNRNS QQGSKRNILA HYDLGNALYE QFLDREMLYS SALYPHSEAS LADAQLHKLK 180
  181 TICERLDLKP GQTLLEIGTG WGALAIYAAK NYGVHVTTTT ISDAQYAYAK ARVEREGLSD 240
  241 SVTLLTEDYR NLSGQYDRLV SIEMIEAVGH EYLPGFFKKL ESLLKPEGRM LLQAITISDQ 300
  301 RYDSYRKSVD FIQRYIFPGG CLPSVQQMVG HLAKRTDMQV WSIDDMGLDY AKTLKDWHDN 360
  361 FDRSVAQIQT LGYGEDFIRM WKFYLSYCEG GFLERTTSTV HLVAVRPGYR LPNAINRC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..348] PSI-BLAST 26.0 Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase
    2 View Details [349..418] PSI-BLAST 39.69897 CmaA1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • transcription factor activity
    		•  1.13996978841074 bayes_pls_golite062009
  • transferase activity
    		•  0.999964866871553 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.644010137949015 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.635463629299812 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.181420092548185 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle