YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24349560, gi|...

General Information:
Name(s) found: gi|24374865 [NCBI NR]
gi|24349560 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24374865|ref|NP_718908.1| pyrroline-5-carboxylate reductase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349560|gb|AAN56352.1|AE015772_12 pyrroline-5-carboxylate reductase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 272 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proline biosynthetic process [ISSLink to PubMed article]
    Molecular Function: pyrroline-5-carboxylate reductase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQQKICFIG AGNMTRSIIS GLIRSGYPAS QVQATNPSQG KLDALATDFG VRVSQDNVSA  60
   61 AQDADVIILS VKPQLMEQVC QALQGIDMSN KLLITIAAGI KASRYSEYLA QPITLIRTMP 120
  121 NTPMQIGVGM TGLYAPQSLS DAQKAIAERL MSSGGEIVWV NEESDINQVI ALAGSSPAYF 180
  181 FLLMESMIDA GKQMGMDEAK ARSLVQQAAL GAAMMAKQNP ELTLGNLREN VTSKGGTTAQ 240
  241 AIATFEAADL RGVVKKAMEN CINRAEEMAK TF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..272] PSI-BLAST 34.0 Crystal structure of a pyrroline-5-carboxylate reductase from neisseria meningitides mc58

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  3.09625241707629 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  2.72731575180636 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
    		•  1.68807048598905 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.65338499044318 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.47309297191111 bayes_pls_golite062009
  • DNA binding
    		•  1.02274180655721 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.955628854752953 bayes_pls_golite062009
  • pyrroline-5-carboxylate reductase activity
    		•  0.910660658157254 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.901776352952123 bayes_pls_golite062009
  • phosphogluconate dehydrogenase (decarboxylating) activity
    		•  0.894434286717571 bayes_pls_golite062009
  • binding
    		•  0.553666136934364 bayes_pls_golite062009
  • transcription factor activity
    		•  0.368443846770004 bayes_pls_golite062009
  • structural molecule activity
    		•  0.345975336806588 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
    		•  0.26638821705482 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle