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Protein Overview: gi|24374852, gi|...

General Information:
Name(s) found: gi|24374852 [NCBI NR]
gi|24349544 [NCBI NR]
Description(s) found:
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  • gi|24374852|ref|NP_718895.1| anti-oxidant AhpCTSA family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349544|gb|AAN56339.1|AE015771_9 antioxidant, AhpC/TSA family [Shewanella oneidensis MR-1] [NCBI NR]
  • antioxidant, AhpC/TSA family [Shewanella oneidensis MR-1]gi|24349544|gb|AAN56339.1| antioxidant, AhpC/TSA family [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • antioxidant, AhpC/TSA family [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 197 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxygen and reactive oxygen species metabolic process [ISSLink to PubMed article]
    Molecular Function: antioxidant activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKYVSFLAA GCVFSLMLLS PMAIANDKSQ VMMGEKTVTL EGKLPKLEQM APRFKVVDDK  60
   61 FNPINLTDFK GKTILISAVP SLDTGVCALQ TKRFNSEVGH FSDNVVMLTI STDLPFAQKR 120
  121 FCKVENVENI KVLSDSVWRD FGEKYGLLIE DYGLLARAIF IIDAEGKLKY QELVPNITEH 180
  181 PNYDAALEAL KTIQAQQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..197] PSI-BLAST 30.69897 Probable thiol peroxidase PsaD

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • antioxidant activity
    		•  3.8464796631544 bayes_pls_golite062009
  • peroxidase activity
    		•  3.44705858438242 bayes_pls_golite062009
  • oxidoreductase activity, acting on peroxide as acceptor
    		•  3.44705858438242 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  2.23310780102446 bayes_pls_golite062009
  • peroxiredoxin activity
    		•  2.12777217096121 bayes_pls_golite062009
  • glutathione peroxidase activity
    		•  2.012364779649 bayes_pls_golite062009
  • thioredoxin peroxidase activity
    		•  1.96134566495756 bayes_pls_golite062009
  • selenium binding
    		•  1.66775674348908 bayes_pls_golite062009
  • protein disulfide oxidoreductase activity
    		•  1.47769936616412 bayes_pls_golite062009
  • disulfide oxidoreductase activity
    		•  1.32811008894503 bayes_pls_golite062009
  • binding
    		•  0.828696005067827 bayes_pls_golite062009
  • catalytic activity
    		•  0.672192331361968 bayes_pls_golite062009
  • protein binding
    		•  0.134341907247724 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.0801269279614203 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle