YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24374740, gi|...

General Information:
Name(s) found: gi|24374740 [NCBI NR]
gi|24349402 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|24374740|ref|NP_718783.1| flagellar MS-ring protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349402|gb|AAN56227.1|AE015760_6 flagellar M-ring protein FliF [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 553 amino acids

    Gene Ontology:
    Cellular Component: bacterial-type flagellum basal body [ISSLink to PubMed article]
    Biological Process: ciliary or flagellar motility [ISSLink to PubMed article]
    Molecular Function: structural molecule activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQGVQQEHK SGVLGNLGGV DMMRQITMIL ALAICLALAV FVMIWAQEPE YRPLGKMETQ  60
   61 EMVQVLDVLD KNKIKYQIDV DVVKVPEDKY QEVKMMLSRA GIDSAATSKQ DFLTQDSGFG 120
  121 VSQRMEQARL KHSQEENLAR AIEQLQSVSR AKVILALPKE NVFARNTAQP SATVVINTRR 180
  181 GGLGQGEVDA IVDIVASAVQ GLEPSRVTVT DSNGRLLNSG SQDGVSARAR RELELVQQKE 240
  241 TEYRTKIDSI LSPILGHDNF TSQVDVSMDF TAVEQTAKRF NPDLPSLRSE MTVENNSTGG 300
  301 STGGIPGALS NQPPMESNIP QEAATAATES VAAGNSHREA TRNFELDTTI SHTRQQIGVV 360
  361 RRVSVSVAVD FKPGAAGENG QVARVARTEQ ELTNIRRLLE GAVGFSAQRG DVLEVVTVPF 420
  421 MDQLVEDVPA PELWEQPWFW RAVKLGVGAL VILVLILAVV RPMLKRLIYP DRVNMPEDGR 480
  481 LGNELAEIED QYAADTLGML NTKEAEYSYA DDGSILIPNL HKDDDMIKAI RALVANEPEL 540
  541 STQVVKNWLQ DNG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..227] PSI-BLAST 32.221849 Crystal structure of enteropathogenic E.coli (EPEC) type III secretion system protein EscJ
    2 View Details [228..420] Pfam 79.657577 No description for PF08345.2 was found. No confident structure predictions are available.
    3 View Details [421..553] MSA 2.186997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle