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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24374740, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQGVQQEHK SGVLGNLGGV DMMRQITMIL ALAICLALAV FVMIWAQEPE YRPLGKMETQ  60
   61 EMVQVLDVLD KNKIKYQIDV DVVKVPEDKY QEVKMMLSRA GIDSAATSKQ DFLTQDSGFG 120
  121 VSQRMEQARL KHSQEENLAR AIEQLQSVSR AKVILALPKE NVFARNTAQP SATVVINTRR 180
  181 GGLGQGEVDA IVDIVASAVQ GLEPSRVTVT DSNGRLLNSG SQDGVSARAR RELELVQQKE 240
  241 TEYRTKIDSI LSPILGHDNF TSQVDVSMDF TAVEQTAKRF NPDLPSLRSE MTVENNSTGG 300
  301 STGGIPGALS NQPPMESNIP QEAATAATES VAAGNSHREA TRNFELDTTI SHTRQQIGVV 360
  361 RRVSVSVAVD FKPGAAGENG QVARVARTEQ ELTNIRRLLE GAVGFSAQRG DVLEVVTVPF 420
  421 MDQLVEDVPA PELWEQPWFW RAVKLGVGAL VILVLILAVV RPMLKRLIYP DRVNMPEDGR 480
  481 LGNELAEIED QYAADTLGML NTKEAEYSYA DDGSILIPNL HKDDDMIKAI RALVANEPEL 540
  541 STQVVKNWLQ DNG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle