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Protein Overview: gi|24349351, gi|...

General Information:
Name(s) found: gi|24374699 [NCBI NR]
gi|24349351 [NCBI NR]
Description(s) found:
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  • gi|24374699|ref|NP_718742.1| glucose-1-phosphate-thymidylyltransferase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349351|gb|AAN56186.1|AE015756_7 glucose-1-phosphate-thymidylyltransferase [Shewanella oneidensis MR-1] [NCBI NR]
  • glucose-1-phosphate-thymidylyltransferase [Shewanella oneidensis MR-1]gi|24349351|gb|AAN56186.1| glucose-1-phosphate-thymidylyltransferase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • glucose-1-phosphate-thymidylyltransferase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 304 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: polysaccharide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: glucose-1-phosphate thymidylyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELNTQHSTL KTHNTKGIIL AGGSGTRLYP ITKGVSKQLL PVYDKPMIYY PISVLMLAGI  60
   61 RDILIITTPE DQSSFQRLLG DGSDFGISLQ YAVQVTPDGL AQAFIIGEEF IGNDNVCLAL 120
  121 GDNIFWGQGF SPILKKAAAR PTGASVFGYQ VKDPERFGVV EFDQDLKAIS IEEKPLKPKS 180
  181 NFAVTGLYFY DNRVVNIAKN VKPSERGELE ITSINQAYLE MGKLNVELLG RGFAWLDTGT 240
  241 YESLLEAASF VETIEKRQGY KIACLEEIAW RNHWLSNEQI LKVANEMSKN SYGQYLLGLV 300
  301 EIKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..304] PSI-BLAST 84.0 RffH

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • uridylyltransferase activity
    		•  3.74072767898515 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  2.70047942699289 bayes_pls_golite062009
  • UTP:glucose-1-phosphate uridylyltransferase activity
    		•  2.65167602524122 bayes_pls_golite062009
  • UTP-monosaccharide-1-phosphate uridylyltransferase activity
    		•  2.46432078102948 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  2.33861720107822 bayes_pls_golite062009
  • transferase activity
    		•  2.17535315350752 bayes_pls_golite062009
  • catalytic activity
    		•  1.88676710996045 bayes_pls_golite062009
  • acetylgalactosaminyltransferase activity
    		•  1.33788133706753 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.17054423506287 bayes_pls_golite062009
  • polypeptide N-acetylgalactosaminyltransferase activity
    		•  1.10309252319727 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.02084820914491 bayes_pls_golite062009
  • cytidylyltransferase activity
    		•  0.983416157001861 bayes_pls_golite062009
  • mannosyltransferase activity
    		•  0.91123217364068 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.897978517422275 bayes_pls_golite062009
  • UDP-N-acetylglucosamine diphosphorylase activity
    		•  0.513376694534047 bayes_pls_golite062009
  • mannose-phosphate guanylyltransferase activity
    		•  0.2363835251362 bayes_pls_golite062009
  • guanylyltransferase activity
    		•  0.0539392112504681 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle