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Protein Overview: gi|24374688, gi|...

General Information:
Name(s) found: gi|24374688 [NCBI NR]
gi|24349337 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24374688|ref|NP_718731.1| asparagine synthetase, glutamine-hydrolyzing [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349337|gb|AAN56175.1|AE015755_4 asparagine synthetase, glutamine-hydrolyzing [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 643 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: asparagine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: asparagine synthase (glutamine-hydrolyzing) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGFAGFFNT SNLTDHARIL ECMGLELFNR GPDSFGIWFN SDDRIGLVHR RLAIVDLSAA  60
   61 GHQPMTSDSG RYIISYNGEI YNHQELRDEL ESIRQYNWRG HSDTETLLAA IEQWGLKITL 120
  121 QKATGMFGIA LWDTLNKELY LARDRFGEKP VYYGLHKDAF IFASQLNAFR AYPDFKPEIN 180
  181 RDSITLLLRH NYIPAPYSIY SDIHKLLPAT ILKLDSNNNI SLETYWSAKD IMSNASSTET 240
  241 DLPVGKQVEA LENTLKKAVA LQMSADVPLG AFLSGGVDSS LIVSLMQAQS NKPVKTFSIG 300
  301 FDDPRFNEAV FAKEVAKHLG TEHTELYLTA EDALEVIPKL AEIYDEPFSD SSQIPTFLVS 360
  361 KIARQYVTVS LSGDAGDELF CGYNRYLMTS KVWKRLSVLP VFLRSFLANV FTFVPVNVWN 420
  421 LFGKLLPSRL QLSNLGDKLH KAAAVLACRD VEQLYLGLVS HWQNPEQVVL GSKEPLTVLT 480
  481 DPKRKANFSD PILQMMAQDT LSYLTDDILV KVDRAAMAVS LETRVPFLDH SVLEHAWRLS 540
  541 LDLKLRDGKT KWCLREILYK YVPKDLIERP KMGFAVPLDA WLRGPLKVWA DNLLAAERLR 600
  601 QEGFFDAELI DRMWQEHKSG KRNWQYQLWD ILMFQSWYEK YHK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..538] PSI-BLAST 76.0 Asparagine synthetase B, C-terminal domain; Asparagine synthetase B, N-terminal domain
    2 View Details [539..643] PSI-BLAST 9.522879 Argininosuccinate synthetase, N-terminal domain; Argininosuccinate synthetase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • asparagine synthase (glutamine-hydrolyzing) activity
    		•  3.49425794794018 bayes_pls_golite062009
  • asparaginase activity
    		•  2.94567124791739 bayes_pls_golite062009
  • catalytic activity
    		•  1.19663085909195 bayes_pls_golite062009
  • carbon-nitrogen ligase activity, with glutamine as amido-N-donor
    		•  1.17174228126736 bayes_pls_golite062009
  • N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
    		•  0.886636554961189 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.66

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle