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Protein Overview: gi|24374583, gi|...

General Information:
Name(s) found: gi|24374583 [NCBI NR]
gi|24349190 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374583|ref|NP_718626.1| DNA topoisomerase III [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349190|gb|AAN56070.1|AE015742_6 DNA topoisomerase III [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 702 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA topological change [ISSLink to PubMed article]
    DNA unwinding involved in replication [ISSLink to PubMed article]
    Molecular Function: DNA binding [ISSLink to PubMed article]
    DNA topoisomerase type I activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILYIAEKPS LGRAIADVLP KPHKKGEGFI EDANGNCVSW CVGHLLEQAE PDAYNPDFKS  60
   61 WKFEHLPIVP EKWQLKPKAA TRSQLTVLKK LIKQADTLVN AGDPDREGQL LVDEVIAYLG 120
  121 VTGDKLQQTQ RLLISDLNPQ AVKRALSQLR SNREFIPLST SALARSRADW LYGMNMTRAY 180
  181 TIQGKKVGYQ GVLSVGRVQT PLLGLIVRRD EEIAHFQSKP FYEVLAHLVT DKQQFFSAKW 240
  241 QPSEACQPYM DDEGRVLSKG LAQNVVRRIT DKPAKVTQLS TKDKQQSAPL PYSLSALQID 300
  301 AAKRFGMSAK EVLDTCQSLY ERHKLITYPR SDSRYLPTEQ HGLASSVLNA ITSGAPELVA 360
  361 HSEAPNPRLK SKAWDDKKVD AHHAIIPTEK QPNLGSLSQR ERQLYLHIAR QYLAQFYPAY 420
  421 CYSETAVEVT IEGGLFKTKA RQDKSLGWKQ LFAREEGERK DTSNTETFAQ DDKDKDEGEY 480
  481 AGQLPPLILG QVLHCNQGEL VEKQTQPPKA FTDATLLGAM TGINRYVTDP EIRKILKETD 540
  541 GLGTEATRAG IIELLFKRGF IQRQGKSIVA TEVGKGLINS LPLSATTPDM TALWEASLNG 600
  601 ICHKDISYQG FMQPLLGTLH SLIQNAGAQL PSALNGLKGQ GFKRAATKKS GYRKAGVRGA 660
  661 AGGKKAGTGA KNARNSAAAS STSTTAKPTV PRRRTSKATA QA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..702] PSI-BLAST 1000.0 No description for 2o19A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle