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Protein Overview: TRPD_SHEON

General Information:
Name(s) found: TRPD_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Anthranilate phosphoribosyltransferase OS=Shewanella oneidensis (strain MR-1) GN=trpD PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 347 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tryptophan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: anthranilate phosphoribosyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETSIQPLL DILFQGKALT REQTASLFSV LIQGEMNETV MAGMLMALKI RGETIEEISG  60
   61 AADAMRAAAK PFPYPESSRS QGVIDIVGTG GDGFNTINIS TTAAFVAAAA GAKVAKHGNR 120
  121 SVSSKSGSSD LLAQFGIDLT MSPELASHCL EALNLCFLFA PHYHGGVKHA VPVRQTLKTR 180
  181 TLFNVLGPLI NPARPEFMLL GVYSAELVTP IARVLQALGT QRAMVVHGSG LDEVALHGST 240
  241 QVAELKDGEI IEYQLTPADF GVPQAHISEL EGGEPAHNAL ITQQILQGHG CDAHTHAVAI 300
  301 NAGCALYLCG LSESVKMGTA LALSTIKTGK AYELLHKLAT VSSQSQE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..347] PSI-BLAST 97.69897 Anthranilate phosphoribosyltransferase (TrpD)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • anthranilate phosphoribosyltransferase activity
    		•  4.94723089078793 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.602719004527 bayes_pls_golite062009
  • catalytic activity
    		•  2.36226573018655 bayes_pls_golite062009
  • transferase activity
    		•  1.44341339379755 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  1.42809090251675 bayes_pls_golite062009
  • anthranilate synthase activity
    		•  0.23338579105964 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle