YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24374545, gi|...

General Information:
Name(s) found: gi|24374545 [NCBI NR]
gi|24349137 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24374545|ref|NP_718588.1| anthranilate synthase component II [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349137|gb|AAN56032.1|AE015738_7 glutamine amido-transferase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 202 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tryptophan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLYLLDNFD SFTYNLVDQF RSLGCEVVIY RNDVAADYIA DKLLAETAPT ALVLSPGPGA  60
   61 PHEAGSMMEL IDKVAGKVPM LGICLGHQAM VEYYGGKVER APFVVHGKAS PTFHNGTGVF 120
  121 ANLPSPLPVA RYHSLVATKV PNCLDVIATT DDMPMAILHA KHRAVGFQFH PESILTTLGS 180
  181 TLLTQTLVYL TQAMTSRHAG AK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..202] PSI-BLAST 40.69897 Anthranilate synthase GAT subunit, TrpG

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 4-amino-4-deoxychorismate synthase activity
    		•  4.48164623771604 bayes_pls_golite062009
  • anthranilate synthase activity
    		•  2.51214170411838 bayes_pls_golite062009
  • ligase activity
    		•  1.77692713123297 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  1.35896725827905 bayes_pls_golite062009
  • catalytic activity
    		•  1.30391542469987 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.628648036096965 bayes_pls_golite062009
  • imidazoleglycerol-phosphate synthase activity
    		•  0.270391651600004 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.0769356405014503 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle