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Protein Overview: gi|24374529, gi|...

General Information:
Name(s) found: gi|24374529 [NCBI NR]
gi|24349118 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374529|ref|NP_718572.1| prophage LambdaSo, DNA modification methyltransferase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349118|gb|AAN56016.1|AE015737_14 prophage LambdaSo, DNA modification methyltransferase, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 321 amino acids

    Gene Ontology:
    Cellular Component: provirus [TASLink to PubMed article]
    Biological Process: DNA modification [ISSLink to PubMed article]
    Molecular Function: DNA-methyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVNSQYASA LRELKTKQSH LLKEVGDQWR TPDALYWGIF AKFGPFILDL FSDGDNAKCP  60
   61 RYYTVEDNAL IQDWTKDLAG GKAFANPPYS RSSYEDNQAI TGMRNIIAKS IDERDKGAKF 120
  121 VYLIKSATSE VWWPEDADHV CFIRGRISFD LPDWFVPADK KQEASSAGFA CAIAVFDKTW 180
  181 RGERMSYVNR DDLLRDGQVM LNMVAAAANK KSATYITETI ETRPDIAEPV EPIIEHQVND 240
  241 QLDIEDQIAR DSTVANSVWP KEVLELVEQA FNDNPNTKTD VRQQMLCERV NQRLLDNVLK 300
  301 KDIIAEVNNM LDRCERVEDA A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] Pfam 56.958607 No description for PF05869.2 was found. No confident structure predictions are available.
    2 View Details [189..321] MSA 1.018962 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle