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Protein Overview: gi|24349089, gi|...

General Information:
Name(s) found: gi|24374504 [NCBI NR]
gi|24349089 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374504|ref|NP_718547.1| prophage LambdaSo, site-specific recombinase phage integrase family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349089|gb|AAN55991.1|AE015736_7 prophage LambdaSo, site-specific recombinase, phage integrase family [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 399 amino acids

    Gene Ontology:
    Cellular Component: provirus [TASLink to PubMed article]
    Biological Process: provirus integration [ISSLink to PubMed article]
    Molecular Function: prophage integrase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIACIALSD AAIKRAVADE SITEIRDPRY PLRLRLGSSR SRGSWYLVTN KDGKASWAKV  60
   61 ANWPLVSAKA IIDDLPTLSI QHRQDQSVKV NTWLSCGGLL NWYLTRSQAD TSLSIKRRRN 120
  121 IKCTIVKHLL PVLGEVMLSE LNHHKVDELL IWPLQARYSI GSVRQYYAVL RKAFKQATVL 180
  181 KLISDDPLAS LSFTDFIATP IATKPPQLQA TDLPKLLSDL DTASDSAALL VFIMLAYGTR 240
  241 IGETRLLKWS YYDEPNAKLV IPANITKTQA QLTIPISGLM ADILRWHKSM QAAAGYRGGY 300
  301 LFPHPCRNTG LDERGANSLV KQVSGGEWTA HDLRKLARSC WADLGIDYMV AEQMLNHSMT 360
  361 KLDQAYIHTY LADQKREAIE LWHKHLLSIH HLFAERICK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] MSA 5.851994 View MSA. Confident ab initio structure predictions are available.
    2 View Details [85..399] PSI-BLAST 45.522879 SITE-SPECIFIC RECOMBINASE, XERD


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle