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Protein Overview: gi|24349071, gi|...

General Information:
Name(s) found: gi|24374489 [NCBI NR]
gi|24349071 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374489|ref|NP_718532.1| prophage LambdaSo, HK97 family major capsid protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349071|gb|AAN55976.1|AE015735_10 prophage LambdaSo, major capsid protein, HK97 family [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: provirus [TASLink to PubMed article]
    Biological Process: viral capsid assembly [ISSLink to PubMed article]
    Molecular Function: structural molecule activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNPNFEKQI EELGVNLTKI GDQIKSAAEE TNKQIKASGE MHAETRDKVD KLLSEQGALQ  60
   61 ARLQEAEQKL LKGAQSNQQE REQSIGERVV NDKEMEGVSS SFRGSRRVGM PRSAITSATG 120
  121 SGAGLVRPDR MAGIVAGPER RLTIRDLIAP GETESNTIEY VKETGFTNNA APVAEGAAKP 180
  181 YSEITFGLVS AGVRTIAHLF KASRQILDDS KQLQSFINAR ARYGLMLKEE VQLLYGNNTG 240
  241 ANLHGIMLQA SAYVKPTGAT VDTEQHIDRI RLALLQAALA EYAADGIVLN PIDWAVIETL 300
  301 KDSNKNYLIG KPQGQTVPTL WNRPVVETQS IVQNEFLVGA FQMGAQIYDR MDIEVLISTE 360
  361 NDKDFENNMV SIRAEERLAL AVYRPEAFVK GNFTFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] PSI-BLAST 8.0 Heavy meromyosin subfragment
    2 View Details [115..396] PSI-BLAST 70.09691 STRUCTURE OF THE DSDNA BACTERIOPHAGE HK97 MATURE EMPTY CAPSID


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle