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Protein Overview: gi|24374479, gi|...

General Information:
Name(s) found: gi|24374479 [NCBI NR]
gi|24349059 [NCBI NR]
Description(s) found:
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  • gi|24374479|ref|NP_718522.1| prophage LambdaSo, tail length tape meausure protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349059|gb|AAN55966.1|AE015734_11 prophage LambdaSo, tail length tape meausure protein [Shewanella oneidensis MR-1] [NCBI NR]
  • prophage LambdaSo, tail length tape meausure protein [Shewanella oneidensis MR-1]gi|24349059|gb|AAN55966.1| prophage LambdaSo, tail length tape meausure protein [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • prophage LambdaSo, tail length tape meausure protein [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 914 amino acids

    Gene Ontology:
    Cellular Component: provirus [TASLink to PubMed article]
    Biological Process: virion assembly [ISSLink to PubMed article]
    Molecular Function: structural molecule activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANKSLGTLT LNMVAETGSF VEGQTKAERA LAKTEAAAAK QKAELNRLLG QIDPLVAEYS  60
   61 KLDKMEQQLR RHRESGSLQQ AEYDTYSKKI AQMRTEVGKA GVEYDKTGMS AKQMAFATRG 120
  121 LPAQFTDIAV SLQAGQNPMT VFLQQGGQLK DMFGGVGPAA KAMGGYIMGL INPFTVAASA 180
  181 AGVMALAYYQ GSIEADRLRN ALILTGNSAG TTTDQLMEAA KRIDAISGTQ RQASAALAEV 240
  241 ANTGKFTASQ IELVGLAAVK MENTTGKAVA DTVAEFVKLA DDPVKAAEEL NKKFNFLSAS 300
  301 TYEQIVALKE AGKSTAAAEL AFSAYSNAID QRTKEITGNL GSIEKAWKAI KSGAVESWDQ 360
  361 ILNIGRADTL EQQYAALSKR IEDLRPKTKQ GEWGYGLARE ELKALEAERD SVMALMKTER 420
  421 DRSAEQAKRA KLNQDSIEAQ RAIAKVTEET LTNEQKRNKA IKEYNDNIEK VRKADPNSAL 480
  481 LNADKIKRDL ASIEEKFKDS AKTTKAFADD AATSYLMRLR ETQAGLQGQL DRNTKLTQSQ 540
  541 KELLQFEQQI ADIKNKDVLT AQQKSLLAEQ SVIRAQLEKN VALDEELKKR NEALRLQSYS 600
  601 ANLAANLAAE QQRNADKLAS FGLGDKAQQR LGDRQSIERD IERAQGKALS DNLAGRTTDE 660
  661 EYQAQLVMLK QNLSDRLAAQ NEYYIALDAK QADWTNGARS SMQNYIDAAA DMAGQTEKLF 720
  721 DSAFGGMTDA LTDFVTTGKA DFAWLTKSIL ADIAKIAMQK AIAGIASSIF GGFSEGGAVG 780
  781 YSSGGYTGAG GKYEPAGIVH RGEVVWSQRD VARAGGVATV EAMRKGHKGY DNGGIVGGAA 840
  841 YNGVPASATA GAGVVHVEVN IDQSGNATTT ADTPALSQFG SELGKFVEQK YRQLLANDLK 900
  901 PNGQIGRTMA GGYR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..340] PSI-BLAST 14.69897 Heavy meromyosin subfragment
    2 View Details [341..761] FFAS03 1.43 No description for 2oevA was found.
    3 View Details [762..914] MSA 1.121963 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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