YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24348817, gi|...

General Information:
Name(s) found: gi|24374282 [NCBI NR]
gi|24348817 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24374282|ref|NP_718325.1| adenosylmethionine--8-amino-7-oxononanoate aminotransferase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348817|gb|AAN55769.1|AE015713_2 adenosylmethionine--8-amino-7-oxononanoate aminotransferase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 461 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biotin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: adenosylmethionine-8-amino-7-oxononanoate transaminase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNLLDFDFD SAHIWHPYTS MTRALPVFGV HSAQGCELEL VDGRKLIDGT SSWWACVHGY  60
   61 GHPAILTAME QQLHQLSHVM FGGITHEPAI ELCKKLLAMT CEPLTKVFLC DSGSIAVEVA 120
  121 IKMALQYWQG QDLPLAQKAQ KQRILTVKKG YHGDTFAAMS VCDPEGGMHT MFGEAVIKQC 180
  181 FVDAPQTPFG ESLHQDDLAP MQRILREQHQ DIAAVIIEPI MQGAGGMRFY SSEYLRGLRA 240
  241 LCDEYNVLLI LDEIATGFGR TGKLFAYEHT DITPDILCLG KALTGGYISL AATLCTDNVA 300
  301 QGISQSPAGV FMHGPTFMGN PLACAAACAS LDLINQQEWP AQVAAIEQQM QRELADAIDI 360
  361 PSVKAVRVLG AVGVLEMHQA VNTAALQQQF VDLGVWVRPF ANLIYIMPPY VISSAQLSQL 420
  421 TQAMKQVAAT ITPPNITPPN TTPELASQGW HTDQNISISH G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..461] PSI-BLAST 98.221849 Crystal Structure of the D147N Mutant of 7,8-Diaminopelargonic Acid Synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 4-aminobutyrate transaminase activity
    		•  3.63797881096751 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  3.359406422625 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • 5-aminolevulinate synthase activity
    		•  1.85905571238884 bayes_pls_golite062009
  • adenosylmethionine-8-amino-7-oxononanoate transaminase activity
    		•  1.74778109525713 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  1.63055151623667 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  1.63055151623667 bayes_pls_golite062009
  • transferase activity
    		•  1.44093490824786 bayes_pls_golite062009
  • N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
    		•  1.4383564662931 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  1.19150094103499 bayes_pls_golite062009
  • succinate-semialdehyde dehydrogenase binding
    		•  0.78144409237642 bayes_pls_golite062009
  • carbon-sulfur lyase activity
    		•  0.698312655247044 bayes_pls_golite062009
  • intramolecular transferase activity, transferring amino groups
    		•  0.659071155545801 bayes_pls_golite062009
  • N-succinyltransferase activity
    		•  0.52897097514616 bayes_pls_golite062009
  • binding
    		•  0.49769115245722 bayes_pls_golite062009
  • ornithine-oxo-acid transaminase activity
    		•  0.311107335626334 bayes_pls_golite062009
  • N-acyltransferase activity
    		•  0.2609065149092 bayes_pls_golite062009
  • kynureninase activity
    		•  0.242752584041108 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.186646089509162 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.16957228630576 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.16957228630576 bayes_pls_golite062009
  • cystathionine beta-lyase activity
    		•  0.15938456446406 bayes_pls_golite062009
  • sulfurtransferase activity
    		•  0.0450490929307473 bayes_pls_golite062009
  • DNA binding
    		•  0.0281750086102144 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle