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Protein Overview: gi|24348809, gi|...

General Information:
Name(s) found: gi|24374278 [NCBI NR]
gi|24348809 [NCBI NR]
Description(s) found:
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  • gi|24374278|ref|NP_718321.1| dithiobiotin synthetase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348809|gb|AAN55765.1|AE015712_9 dethiobiotin synthase [Shewanella oneidensis MR-1] [NCBI NR]
  • dethiobiotin synthase [Shewanella oneidensis MR-1]gi|24348809|gb|AAN55765.1| dethiobiotin synthase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • dethiobiotin synthase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
  • dithiobiotin synthetase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 231 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biotin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: dethiobiotin synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFVTGTDTD SGKTLVSTAL LTAFNRDVLR AGSSRLSLGV KPVASGCEIT EKGLRNSDAL  60
   61 KLMSASSLKL SYEQVNPISF EPAIAPHIAA KQQRVNLSPE AILAKLDRQA WAQADFCLIE 120
  121 GAGGWRLPLG EGRYLSELVQ QLNLPVILVV GMKLGCLNHA LLTQEAILAD GLTVAGWVAN 180
  181 CVDPNMSVFD ENLASLKEMM VSPFLGCIPH LKQADAEHAA NFMNIQPLLM K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] PSI-BLAST 36.0 CRYSTAL STRUCTURE OF AN ATP DEPENDENT CARBOXYLASE, DETHIOBIOTIN SYNTHASE, AT 1.65 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.37148167194523 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle