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Protein Overview: DEOD3_SHEON

General Information:
Name(s) found: DEOD3_SHEON [Swiss-Prot]
Description(s) found:
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  • gi|24374260|ref|NP_718303.1| purine nucleoside phosphorylase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348787|gb|AAN55747.1|AE015711_4 purine nucleoside phosphorylase [Shewanella oneidensis MR-1] [NCBI NR]
  • Purine nucleoside phosphorylase DeoD-type OS=Shewanella oneidensis (strain MR-1) GN=deoD3 PE=1 SV=1 [Swiss-Prot]
  • purine nucleoside phosphorylase [Shewanella oneidensis MR-1]gi|24348787|gb|AAN55747.1| purine nucleoside phosphorylase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • purine nucleoside phosphorylase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 234 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process [ISSLink to PubMed article]
    Molecular Function: purine-nucleoside phosphorylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAHINAQPT DFAETVIMPG DPLRAKYIAE TYLTDAVEVT NVRNMLGYTG YYQGQRISVM  60
   61 GHGMGISSMV LYGHELINFF GVKRIIRIGS LGATQQHVEM RDVILAQAAG TDSPTNAKRS 120
  121 SGYHMATSAT FSLLHKAYTK ANEKGISVKV GNVFSGDLYY DPDEDMIPAL ERFGVLGIDM 180
  181 EVAGLYGLAH QQGIESLAIL TVSDHCLTGE ETTAQERQLS FNNMIELALE TALN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..234] PSI-BLAST 61.154902 Purine nucleoside phosphorylase, PNP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • purine-nucleoside phosphorylase activity
    		•  3.68206997938506 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  3.66765825367784 bayes_pls_golite062009
  • catalytic activity
    		•  2.18268586151113 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.01261001022129 bayes_pls_golite062009
  • S-methyl-5-thioadenosine phosphorylase activity
    		•  1.6959166270803 bayes_pls_golite062009
  • transferase activity
    		•  1.42022417161912 bayes_pls_golite062009
  • nucleobase binding
    		•  1.33291775180025 bayes_pls_golite062009
  • nucleoside binding
    		•  1.11256863177576 bayes_pls_golite062009
  • purine binding
    		•  1.00226077276304 bayes_pls_golite062009
  • binding
    		•  0.192121943858605 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle