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Protein Overview: gi|24348745, gi|...

General Information:
Name(s) found: gi|24374226 [NCBI NR]
gi|24348745 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374226|ref|NP_718269.1| prophage MuSo2, major head subunit, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348745|gb|AAN55713.1|AE015708_4 prophage MuSo2, major head subunit, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 299 amino acids

    Gene Ontology:
    Cellular Component: provirus [TASLink to PubMed article]
    Biological Process: viral capsid assembly [ISSLink to PubMed article]
    Molecular Function: structural molecule activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATEAQVLEA LQATMSAAYT RGLSAAKPQW NMIATEVPSA GAANFYGWLK DLPGIVEWTG  60
   61 ARQLANLGKH GYSIENKTFE SSISISRDNV DDDQIGQYSV IAQNYGDQVA YFPDTLAYPL 120
  121 LKAGFTTLCY DGQNFFDTDH PLATTPATTF SNVIGDPATD TGEPWFLIDD TKVLKPIVFQ 180
  181 NRRPFVFKNM NPNEEYTWFN NKYAAGVDGR CNVGFSFPQL AIGSKAALTE ANYAAAKKLL 240
  241 LKMKKVDGTP IGTRATKLVV GPDNEAAAKK LISRMLIEGG DTNIYYNDVE IVVSPLVTA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] MSA 1.021937 View MSA. No confident structure predictions are available.
    2 View Details [162..216] MSA 1.021995 View MSA. No confident structure predictions are available.
    3 View Details [217..299] MSA 21.042996 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle