Protein Overview: KDSB_SHEON

General Information:
Name(s) found:	KDSB_SHEON [Swiss-Prot]
Description(s) found: Found 6 descriptions. SHOW ALL	3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella oneidensis (strain MR-1) GN=kdsB PE=1 SV=1 [Swiss-Prot]
Organism:	Shewanella oneidensis MR-1
Length:	245 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	lipopolysaccharide core region biosynthetic process [ISS]
Molecular Function:	3-deoxy-manno-octulosonate cytidylyltransferase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVTLLIPAR YGSSRFPGKP LAPINGKPMI QHVYERASLA KGLTNIYVAT DDERIKSAVE  60
   61 GFGGKVVMTS PDAASGTDRI NDAINQLGLK DDDLVINLQG DQPLIDPTSI EQVISLFERH 120
  121 PGEFEMATLG YEIVNKAELD DPMHVKMVFD NDYYALYFSR ARIPFGRDTK DYPVYKHLGV 180
  181 YAYTRRFVQA FAALPLGRLE DLEKLEQLRA LEYGHKIKVA ISAFDSIEVD TPEDIRKCEQ 240
  241 RLAVD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..245]	PSI-BLAST	43.0	Crystal structure of CMP-KDO synthetase

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
polypeptide N-acetylgalactosaminyltransferase activity	2.87534754775824	bayes_pls_golite062009
3-deoxy-manno-octulosonate cytidylyltransferase activity	2.75368830096228	bayes_pls_golite062009
catalytic activity	2.25720704697246	bayes_pls_golite062009
transferase activity, transferring hexosyl groups	2.04393180556087	bayes_pls_golite062009
transferase activity	1.67251862595728	bayes_pls_golite062009
UDP-glycosyltransferase activity	1.51711005399931	bayes_pls_golite062009
cytidylyltransferase activity	1.30540294475078	bayes_pls_golite062009
transferase activity, transferring glycosyl groups	1.21894113759929	bayes_pls_golite062009
UDP-N-acetylglucosamine diphosphorylase activity	0.696745721981411	bayes_pls_golite062009
nucleotidyltransferase activity	0.67147527259372	bayes_pls_golite062009
uridylyltransferase activity	0.54930147038803	bayes_pls_golite062009
acetylgalactosaminyltransferase activity	0.48277064848483	bayes_pls_golite062009
mannose-phosphate guanylyltransferase activity	0.38929738612511	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	0.280335197569099	bayes_pls_golite062009
galactosyltransferase activity	0.21201767008409	bayes_pls_golite062009
glucose-1-phosphate thymidylyltransferase activity	0.204810937394121	bayes_pls_golite062009
guanylyltransferase activity	0.14847697203788	bayes_pls_golite062009
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00302319544700058	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

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