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Protein Overview: gi|24348485, gi|...

General Information:
Name(s) found: gi|24374018 [NCBI NR]
gi|24348485 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374018|ref|NP_718061.1| carbonic anhydrase family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348485|gb|AAN55505.1|AE015689_5 carbonic anhydrase family protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 201 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [ISSLink to PubMed article]
    Molecular Function: carbonate dehydratase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLKPLFDN NLRWAGRISQ EHPDFFEQLA KQQNPEYLWI GCSDSRVPSN QIIDLMPGEV  60
   61 FVHRNIANMV IHTDLNCLSV LQYAIDVLKV KHIMVVGHYG CGGVRAAMGN QRLGLIDNWL 120
  121 GHLRDVYRLH HDELMQMDEA KRFDRLCELN VIEQVSNVTS STIVQEAWAR GQELAVHGWI 180
  181 YGIDNGLLTD LDVTVDRAQV V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] PSI-BLAST 67.221849 beta-carbonic anhydrase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • carbonate dehydratase activity
    		•  2.96380803089124 bayes_pls_golite062009
  • catalytic activity
    		•  1.85658156053797 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  1.691366175135 bayes_pls_golite062009
  • hydro-lyase activity
    		•  1.65497918079842 bayes_pls_golite062009
  • lyase activity
    		•  1.62374861994341 bayes_pls_golite062009
  • binding
    		•  1.32962036184517 bayes_pls_golite062009
  • protein binding
    		•  0.132818074687599 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle