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Protein Overview: gi|24373990, gi|...

General Information:
Name(s) found: gi|24373990 [NCBI NR]
gi|24348444 [NCBI NR]
Description(s) found:
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  • gi|24373990|ref|NP_718033.1| thiF protein, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348444|gb|AAN55477.1|AE015685_6 thiF protein, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • thiF protein, putative [Shewanella oneidensis MR-1]gi|24348444|gb|AAN55477.1| thiF protein, putative [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • thiF protein, putative [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 300 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: thiamin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: nucleotidyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATAQKSSS LNDKDFIRYS RQIFLPEVGE AGLLQLKQCH VVIIGCGGLG QLAAQYLACA  60
   61 GIGSITLVDD DRVELSNLPR QLLFNEADIG QYKAWVAKQK LAVLAPDCQL FAFVQMLTLD 120
  121 SAESLLAHVA TANRQQSALL LDCTDNLAAR HCINQLCIEH ALPLVSASIA AFNGQLFAVD 180
  181 QQRFPAGGCY HCVFPADTYA PQNCSNQGVL GPSVGVMASM QALLAIQLLL TATVPNLEHS 240
  241 TKPQAVGAEH LLGRFWRFDA KSLQWHSARL TRDPECEVCA PSWNTNTDHV LKSVHKGELL 300
  301

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..300] PSI-BLAST 72.39794 Molybdenum cofactor biosynthesis protein MoeB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • small protein activating enzyme activity
    		•  1.61603220653307 bayes_pls_golite062009
  • catalytic activity
    		•  1.59245438598251 bayes_pls_golite062009
  • URM1 activating enzyme activity
    		•  0.936791644743361 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle