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Protein Overview: SYD_SHEON

General Information:
Name(s) found: SYD_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Aspartate--tRNA ligase OS=Shewanella oneidensis (strain MR-1) GN=aspS PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 591 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: aspartyl-tRNA aminoacylation [ISSLink to PubMed article]
    Molecular Function: aspartate-tRNA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSHYCGDVN KSHVGQEVTL VGWVNRSRDL GGVVFLDLRD REGLVQVVYD PDLPEVFNVA  60
   61 STLRAEFCVQ VKGVVRARPD SQVNAQMKTG EIEVLGKALT IINSSEPLPL SLDNYQNNSE 120
  121 EQRLKYRYLD LRRPEMAQRL MFRAKVTSAV RRFLDSNGFL DIETPILTKA TPEGARDYLV 180
  181 PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF 240
  241 MTSEQVMNKT EEMMRGLFLE MLNVDLGEFP RMTYNEAMRR FGSDKPDLRN PLELVDVADL 300
  301 LKDVEFAVFS GPANDEEGRV AALRIPGGAS LSRKQIDDYT KFVGIYGAKG LAWMKLNDLT 360
  361 QGLEGIQSPV LKFLNENIVN EIINRTGAQT GDIILFGADQ ATVVAESMGA LRLKAGEDFN 420
  421 LLEGQWRPLW VVDFPMFEKI NGSFHAVHHP FTAPRGVTPQ ELEANPANRV SDAYDMVLNG 480
  481 CELGGGSVRI HNQEMQSAVF RILGITDEEA KEKFGFLLEA LRYGTPPHAG LAFGLDRIIM 540
  541 LMTGASSIRD VMAFPKTTTA ACPLTNAPGF ANPQQLAELG IAVVKTAKTE D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..591] PSI-BLAST 176.0 Aspartyl-tRNA synthetase (AspRS); Prokaryotic AspRS, insert domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle