YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24348405, gi|...

General Information:
Name(s) found: gi|24373963 [NCBI NR]
gi|24348405 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|24373963|ref|NP_718006.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348405|gb|AAN55450.1|AE015682_5 ribonucleoside-diphosphate reductase, beta subunit [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 376 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: 2'-deoxyribonucleotide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: ribonucleoside-diphosphate reductase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYSTFCQTP NDATREPMFF GQSVNVARYD QQKYEVFEKL IEKQLSFFWR PEEVDVSRDK  60
   61 IDYNSLPDHE KHIFISNLKY QTLLDSIQGR SPNVAFLPLV SLPELETWIE TWSFSETIHS 120
  121 RSYTHIIRNI VNDPSVIFDD IVVNHEILRR ATDIAEFYDH LIKLTQIYHL LGEGTHVIDG 180
  181 EPVEVNTRTL KKALYLCMMS VNALEAIRFY VSFACSFAFA ERKLMEGNAK IIRLIARDEA 240
  241 LHLNSTQHIL TIMQGGKDDP EMGEIAIECQ QEAYNLFLKA AEQEKEWAKY LFKDGSMIGL 300
  301 NEQILCQYVE YITNQRMKSV NLPQPYAEQT NPLPWMKNWL ESDAVQVAPQ EVEVSSYLVG 360
  361 QIDAAVDSDE FLDFDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..376] PSI-BLAST 118.0 RIBONUCLEOTIDE REDUCTASE R2 SOAKED WITH FERROUS ION AT NEUTRAL PH

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
    		•  12.7205287868529 bayes_pls_golite062009
  • ribonucleoside-diphosphate reductase activity
    		•  12.6679910771829 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH or CH2 groups
    		•  12.0783326936172 bayes_pls_golite062009
  • class I ribonucleotide reductase activity
    		•  7.27682621818194 bayes_pls_golite062009
  • binding
    		•  0.998691281119878 bayes_pls_golite062009
  • catalytic activity
    		•  0.197328811494233 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle