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Protein Overview: gi|24348305, gi|...

General Information:
Name(s) found: gi|24373886 [NCBI NR]
gi|24348305 [NCBI NR]
Description(s) found:
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  • gi|24373886|ref|NP_717929.1| alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348305|gb|AAN55373.1|AE015675_5 alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Shewanella oneidensis MR-1]gi|24348305|gb|AAN55373.1| alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • alpha keto acid dehydrogenase complex, E1 component, alpha subunit [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular amino acid catabolic process [ISSLink to PubMed article]
    Molecular Function: alpha-ketoacid dehydrogenase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKATLNTDT VHRVGFLDKA SLHIPILRIL QADGTTYETA VLPVIDEALA IKIYDTCVFT  60
   61 RVLDERMLGA QRQGRISFYM TCTGEEAAIV GSVAALDPED VILAQYREHA ALRYRGFTTE 120
  121 QFMNQMFSNE KDLGKGRQMP IHYGCAALNY QTISSPLATQ IPQATGVGYS LKMQGKRNVA 180
  181 VCYFGEGAAS EGDFHAGLNM AAVLKCPVIF FCRNNGYAIS TPTEEQFAGN GIASRGVGYG 240
  241 MHTIRVDGND MLAVLAATQQ ARAYAIEHNA PVLIEAMTYR LGAHSSSDDP SGYRSKEEEA 300
  301 KWQQHDPVKR FKLWLINKGW LAEADDAQRY EKYREEVLAA VKVAEKLPIP MLDEIIEDVY 360
  361 DKPTPALKKQ LSELKEHIKK YPQSYPKSAG RL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..392] PSI-BLAST 80.522879 No description for 2j9fA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle