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Protein Overview: SYN_SHEON

General Information:
Name(s) found: SYN_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Asparagine--tRNA ligase OS=Shewanella oneidensis (strain MR-1) GN=asnS PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 466 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: asparaginyl-tRNA aminoacylation [ISSLink to PubMed article]
    Molecular Function: asparagine-tRNA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIASVASVF KGEHAVGSTV TVRGWVRTRR DSKAGISFLA VYDGSCFNPI QGVVPNSLEN  60
   61 YDNEVLKLTA GCSVIVTGDI VESPGAGQAY ELQVTAVEVT GWVEDPDTYP MAAKRHSIEH 120
  121 LRELAHLRPR TNIIGAVARV RNCLSQAIHR FYHENGFVWV STPLITASDC EGAGEMFRVS 180
  181 TLDMENLPRT SDGKVDYDKD FFGKEAFLTV SGQLNGETYA CALSKIYTFG PTFRAENSNT 240
  241 SRHLAEFWMV EPEVAFATLN DIAGLAEGML KYAFNAVLTE RMDDLQFFAQ HVDKTVIERL 300
  301 QSFVSSDFAQ VDYTDAVEIL QKSGREFEFP VSWGIDLSSE HERYLAEEHF KAPVVVKNYP 360
  361 KDIKAFYMRL NEDGKTVAAM DVLAPGIGEI IGGSQREERL DVLDMRLEEM DLNKEDYWWY 420
  421 RDLRRYGTVP HAGFGLGFER LVSYVTGVSN IRDVIPFPRA PRTANF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..466] PSI-BLAST 107.0 No description for 1x54A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle