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Protein Overview: gi|24348151, gi|...

General Information:
Name(s) found: gi|24373768 [NCBI NR]
gi|24348151 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24373768|ref|NP_717811.1| oligo-1,6-glucosidase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348151|gb|AAN55255.1|AE015663_5 oligo-1,6-glucosidase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 540 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [ISSLink to PubMed article]
    Molecular Function: alpha-glucosidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELTWWRGA VIYQIYPRSL LDTNGDGVGD LRGIITKLDY IASLNVDAIW ISPFFKSPMA  60
   61 DFGYDISDYR EIDPLFGSMQ DFDELIEKAH QRGIKVIIDQ VLSHTSDQHA WFIESRESRT 120
  121 NPKADWYVWA DPREDGTPPN NWLAIFGGCA WEWEPRRQQY YLHNFLRSQP DINFHNPDVR 180
  181 QAVLDNVEFW LKKGVDGFRL DAITFCFHDE LLRDNPAKPK EKRQGRGFSE DNPYAYQYHY 240
  241 YNNDRPQTIQ FIEALRQLIN RYPGTVTLGE VSAEDSLAVM AAYTKGDDRL HMAYSFELLT 300
  301 DDYSAAYIRQ TVEALENSIG DGWPCWAIGN HDVQRVASRW GRGKQTSDMA KMLNAMLCSL 360
  361 RGSVCSYQGE ELGLTEVPIE FHELQDPFGK TFWPMFKGRD GCRTPMPWEQ YADFSGFSQV 420
  421 SPWLPIAAAH RALAVDLQEA DCHSVLHGYR QFLAWRKCYP ALITSEIEFL DAPEPLLVFV 480
  481 RKLGEQKLLV CFNLLDAETQ LSLTGLKLQQ ELAGHGLKTA HRQGDSLIFS AYASFYALLA 540
  541

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..540] PSI-BLAST 122.0 CRYSTAL STRUCTURE OF B. CEREUS OLIGO-1,6-GLUCOSIDASE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  4.11319792356479 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  3.92012282533754 bayes_pls_golite062009
  • hydrolase activity
    		•  3.21770945631891 bayes_pls_golite062009
  • chitinase activity
    		•  2.45357334610104 bayes_pls_golite062009
  • structural molecule activity
    		•  2.28030619331997 bayes_pls_golite062009
  • trehalase activity
    		•  2.11042620996316 bayes_pls_golite062009
  • alpha-amylase activity
    		•  2.09193270404736 bayes_pls_golite062009
  • amylase activity
    		•  2.03484942782894 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • alpha-glucosidase activity
    		•  0.96543619590958 bayes_pls_golite062009
  • glucosidase activity
    		•  0.766503513427695 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.763360027922833 bayes_pls_golite062009
  • binding
    		•  0.63693798355947 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.4998423581103 bayes_pls_golite062009
  • maltase activity
    		•  0.442635030512661 bayes_pls_golite062009
  • sugar binding
    		•  0.36459095255871 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.266938437560648 bayes_pls_golite062009
  • beta-N-acetylhexosaminidase activity
    		•  0.263065978664289 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle