Protein Overview: gi|24373658, gi|...

General Information:
Name(s) found:	gi\|24373658 [NCBI NR] gi\|24348005 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|24373658\|ref\|NP_717701.1\| quinone-reactive Ni/Fe hydrogenase, large subunit [Shewanella oneidensis MR-1] [NCBI NR] gi\|24348005\|gb\|AAN55145.1\|AE015651_4 quinone-reactive Ni/Fe hydrogenase, large subunit [Shewanella oneidensis MR-1] [NCBI NR]
Organism:	Shewanella oneidensis MR-1
Length:	567 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	ferredoxin hydrogenase activity [ISS] nickel ion binding [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRVVIDPI TRIEGHLRIE VEVDENNVIN KAWSSSTLWR GIEVILKGRT PMDVGLIVQR  60
   61 ICGVCTYSHY RCGTEAVENA LGIQIPLNAK YLRSLMLTSL FMHDHIVHFY HLHGLDWVDV 120
  121 VSALSADPAK AAQIALKYTD KPIAAGEGEL RAVQERVKGF VETGKLGPFA NAYWGNGTYK 180
  181 FTPEQNLIAL SHYLKALEVQ RVAAEMLAIF GGKSPHPQSL VVGGVTSVRD MLSPARLQEW 240
  241 KQKHEIVTDF ILRAYQADIV MAAEAFGTEP SVLGGVNVKN FMATNDFVLA NGEYLFDQGV 300
  301 IMNGDLAGVS DINPDLIAED VSHAWYNADA PQHPYDGTTI PNYTGFVERD TVYGKLPTLD 360
  361 GDGKYSWVKS PRYQGEPVEV GPLSCLLVSY ARGNKVVVDA VNALLARTGL PVEALFTTLG 420
  421 RTAARMLQTV IVAQEGLKTF DALLTNIQSD ETTYVKPHID PSKEYVGHAM MEAPRGMLSH 480
  481 WIRIKNGVIE NYQAVVPTTW NAGPVDANGK IGPYEASLIG LKLEDPTKPL EVIRIIHSFD 540
  541 PCMACSVHVM DFKGQALSEF RVSPNGQ

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
ferredoxin hydrogenase activity	3.63852106070173	bayes_pls_golite062009
oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor	3.63852106070173	bayes_pls_golite062009
oxidoreductase activity, acting on hydrogen as donor	3.45611813853803	bayes_pls_golite062009
NADH dehydrogenase activity	3.2672032605265	bayes_pls_golite062009
NADH dehydrogenase (quinone) activity	2.70075876201392	bayes_pls_golite062009
NADH dehydrogenase (ubiquinone) activity	2.4952454159327	bayes_pls_golite062009
oxidoreductase activity, acting on iron-sulfur proteins as donors	2.45015987642707	bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor	2.19558031681108	bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH	2.05566803830683	bayes_pls_golite062009
oxidoreductase activity	1.80355547790706	bayes_pls_golite062009
catalytic activity	1.13542026154948	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..567]	PSI-BLAST	151.0	Nickel-iron hydrogenase, large subunit

Protein Overview: gi|24373658, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: