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Protein Overview: gi|24347998, gi|...

General Information:
Name(s) found: gi|24373654 [NCBI NR]
gi|24347998 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24373654|ref|NP_717697.1| hydrogenase maturation protein HypF [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347998|gb|AAN55141.1|AE015650_11 hydrogenase maturation protein HypF [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 808 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein modification process [ISSLink to PubMed article]
    Molecular Function: acylphosphatase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIERRQLHIT GIVQGVGFRP FVYRWATELQ LTGTVLNNAK GVMIELQGPS ARLDIFIQEL  60
   61 ATNPPPLARI DHISHGQLAI KLAETHFEIV QSDSQSDGTK DRSLAALVAV SADKSTCQDC 120
  121 LDDMHNPQDR HFGYAFTNCT NCGPRYSIIN ALPYDRHHTA MADFAMCPDC AKAYQDPLNR 180
  181 RYHAQPVSCP KCGPQLSLKT PKGELIALTP SLNSQDNSMA VLSAAANMLA QGHILAIKGL 240
  241 GGFHLMCDAR NSHAVSQLRQ RKQRKAKPLA VMMPSIEMAK QYVTGTEAEW QTLSSPERPI 300
  301 VLMQALDEHD LNPEIAPNIP KLGVFLPYTP LHHLLLSQFN GPLVATSANV SGEPIITDCD 360
  361 ALISQLGHVV DAIVDHNRPI LNGCDDSVVQ LIQQPNGSTP QVQVLRLARG YAPLSFPLTA 420
  421 PLTRSILAVG AQQKNAIAFG FGANVFLSPH IGDLFSVSAE QYFERTLATF ARLYHFSPEL 480
  481 IVHDKHPDYA PSRWAEAQQQ KSPDTQSGTS GSIQTLSVQH HHAHVLSVMA INQYQEPVLG 540
  541 FSFDGTGLGD DGSLWGGEVL LTRLDKAERL AHFEAISLLG GEQAIKQPVR LLLALLFEQM 600
  601 SLAAVQALDL PILKSLTPIT LSNLHRIWQN GHTIKSSSVG RLFDALACAL GLIDTTQFEG 660
  661 QAGMLIEAAA RRADKQHLPS LILDLPLCSS EDDPRQVQVW CSSQLFKQLI VHITEAPLSS 720
  721 HRQSIIARAF LHSLGDAICS YAARYPSLPI ALCGGVFQNQ YLLEYCLSKL HLQGNIVLPN 780
  781 KHIPVNDGGI ALGQLWYGIH QEANAELS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] PSI-BLAST 28.0 No description for 2gv1A was found.
    2 View Details [92..200] FFAS03 4.06 No description for 2i13A was found.
    3 View Details [201..421] PSI-BLAST 58.045757 Hypothetical protein YciO
    4 View Details [422..486] deduced N/A No confident structure predictions are available.
    5 View Details [487..808] PSI-BLAST 55.30103 No description for 2ivnA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.71407687320205 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle