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Protein Overview: gi|24347925, gi|...

General Information:
Name(s) found: gi|24373597 [NCBI NR]
gi|24347925 [NCBI NR]
Description(s) found:
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  • gi|24373597|ref|NP_717640.1| phage integrase family site specific recombinase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347925|gb|AAN55084.1|AE015645_10 site-specific recombinase, phage integrase family [Shewanella oneidensis MR-1] [NCBI NR]
  • site-specific recombinase, phage integrase family [Shewanella oneidensis MR-1]gi|24347925|gb|AAN55084.1| site-specific recombinase, phage integrase family [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • site-specific recombinase, phage integrase family [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 319 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA recombination [ISSLink to PubMed article]
    Molecular Function: site-specific recombinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKSPFLSG LQQEMRMRGY SIRTEKTYLY WIKAFINFHG KRHPETMGTE EVAQFLTFLA  60
   61 NQRNVAINTQ KIALNALAYL YQKHLHHELG DLGFCYATKQ RYLPTVLSPS EISLILNELD 120
  121 GRDRLIIELL YGSGLRVSEC LRLRIQDIDI ESASLTVRDG KGHKDRQTIL SHRCAEKLTT 180
  181 YIEKAIKIQQ DDNQQGIGPS LPNALERKYP NAFRQHGWMF IFPSTSTCIN PYTGTLCRHH 240
  241 LHQSVIRKAL GNAVRNIQMN KRVTCHTFRH SFATHLLQAG RDIRSVQELL GHNDVSTTQI 300
  301 YTHVLGQHFA GTTSPLDTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..319] PSI-BLAST 49.522879 No description for 2a3vA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle