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Protein Overview: gi|24373494, gi|...

General Information:
Name(s) found: gi|24373494 [NCBI NR]
gi|24347794 [NCBI NR]
Description(s) found:
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  • gi|24373494|ref|NP_717537.1| alpha-ketoglutarate decarboxylase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347794|gb|AAN54981.1|AE015636_5 2-oxoglutarate dehydrogenase, E1 component [Shewanella oneidensis MR-1] [NCBI NR]
  • 2-oxoglutarate dehydrogenase, E1 component [Shewanella oneidensis MR-1]gi|24347794|gb|AAN54981.1| 2-oxoglutarate dehydrogenase, E1 component [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • 2-oxoglutarate dehydrogenase, E1 component [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 939 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tricarboxylic acid cycle [ISSLink to PubMed article]
    Molecular Function: oxoglutarate dehydrogenase (succinyl-transferring) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQGIMKAWL ESSHLSGANS TYVEEMYEAY QEDPQSVSDD WRAVFDNLPP VNGASKDAPE  60
   61 AAHSKVRDYF RSLAMEGRHK SAARVTDPEL DAKQVKVLQL INAHRFRGHQ GANLDPLELW 120
  121 KREPVADLDP AFHGLTKEDM EREFNTGSFA HGGETMKLAD LVKALKATYC GSIGAEYMHI 180
  181 TDTDEKRWIQ QRLEPSLGKA NYDKSVKTRI LEGLNAAEGI EKYLGAKFPG AKRFSLEGGD 240
  241 ALVPMMREII YRAGEAGTKE IVVGMAHRGR LNVLVNVLGK RPAELFDEFA GKHADTHGSG 300
  301 DVKYHQGFSS DFETPGGNVH LALAFNPSHL EIVNPVVMGS VRARQDRRGC KDGLQVMPIT 360
  361 IHGDSAITGQ GIVQETFNMS QTRGFKVGGS IRIVVNNQVG FTTSNHYDVR STEYCTDIAK 420
  421 MVQAPIFHVN SDDPEAVAFV AQLAVDYRNE FKRDVVIDLV CYRRHGHNEA DEPSATQPLM 480
  481 YAKIKKHPTP RKIYADKLIA ENTIAADDVT GMINTYRDAL DQGDCVVKEW RPMTLHTVDW 540
  541 TPYIGREWDE AYDASLPIER LQKLADKLSY VPESHSLQSR VAKIYSDRVA MAKGEKPLDW 600
  601 GFAETLAYAT ILEDKQRVRI TGQDSGRGTF FHRHAVLHNQ NDATTYLPLR NISDGQGPID 660
  661 ITDSVLSEAS VLAFEYGYAT AEPSGLAIWE AQFGDFANCA QVVIDQFLSS GEQKWGRLCG 720
  721 LTMLLPHGYE GQGPEHSSAR LERFLQLCAN HNMQVCVPST PAQVYHMLRR QVVRPMRRPL 780
  781 VVMSPKSLLR HPLAVSSMDE LANGSFQNVI GEIDTLEASK VDRVVFCSGK VYFELLEKRR 840
  841 KENINNIAII RVEQLYPFPH EEMVAALADY QHVKDFVWCQ EEPQNQGAWY SSQHHFWAAI 900
  901 PAGAKLTYAG REASAAPACG YPELHAHQQE SLVNSALKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..939] PSI-BLAST 1000.0 No description for 2jgdB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle