Protein Overview: gi|24373461, gi|...

General Information:
Name(s) found:	gi\|24373461 [NCBI NR] gi\|24347749 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|24373461\|ref\|NP_717504.1\| 3-methylcrotonyl CoA carboxylase, beta subunit [Shewanella oneidensis MR-1] [NCBI NR] gi\|24347749\|gb\|AAN54948.1\|AE015632_14 3-methylcrotonyl CoA carboxylase, beta subunit [Shewanella oneidensis MR-1] [NCBI NR]
Organism:	Shewanella oneidensis MR-1
Length:	535 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	cellular amino acid and derivative metabolic process [ISS]
Molecular Function:	propionyl-CoA carboxylase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQLSSRINA RSDEFKAKSD DMAALVADLK TKLAKIELGG GPVALERHLS RGKRLPRQRV  60
   61 EKLLDAGSPF LELSQFAAFE VYDEEVPAAG IIAGIGRVSG VECMIIANDA TVKGGTYYPI 120
  121 TVKKHIRAQE IASRCHLPCI YLVDSGGANL PRQDEVFPDR DHFGRIFYNQ AQMSAKGIPQ 180
  181 IAVVMGLCTA GGAYVPAMAD ESIIVKDQGT IFLAGPPLVK AATGEEVSAE ELGGADVHTK 240
  241 ISGVADHLAQ NDEHALELAR RAVSRLNHQK EITLRLSPVK PPKFDISELY GIVGTDLKKP 300
  301 FDVKEVIARI VDDSDFDEFK ANYGATLVCG FARIHGYPVG IVANNGILFS ESAQKGAHFI 360
  361 ELCCQRKIPL LFLQNITGFM VGKKYEHEGI AKHGAKMVTA VSCANVPKFT VIIGGSYGAG 420
  421 NYGMCGRAFE PTMMWMWPNA RISVMGGEQA AGVLATVRRD GLARKGEEWS AEDEKAFKAP 480
  481 IIAQYDKEGH PYHASARLWD DGIIDPAQTR DVVGLALSAA LNAPIEDTRF GVFRM

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
CoA carboxylase activity	4.38629333084302	bayes_pls_golite062009
acetyl-CoA carboxylase activity	4.36332808516753	bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds	4.29345455730254	bayes_pls_golite062009
enoyl-CoA hydratase activity	3.92947460544831	bayes_pls_golite062009
methylcrotonoyl-CoA carboxylase activity	2.85169024122548	bayes_pls_golite062009
3-hydroxyacyl-CoA dehydrogenase activity	2.44182589784656	bayes_pls_golite062009
dodecenoyl-CoA delta-isomerase activity	1.80820904754223	bayes_pls_golite062009
catalytic activity	1.46154163027498	bayes_pls_golite062009
propionyl-CoA carboxylase activity	1.20853698666984	bayes_pls_golite062009
ligase activity	0.98581896521131	bayes_pls_golite062009
binding	0.578223105269736	bayes_pls_golite062009
3-hydroxybutyryl-CoA epimerase activity	0.241955774397835	bayes_pls_golite062009
racemase and epimerase activity, acting on hydroxy acids and derivatives	0.099208209617217	bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing C=C bonds	0.0918189681606029	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.88

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..535]	PSI-BLAST	147.0	Crystal structure of propionyl-CoA carboxylase, beta subunit (TM0716) from THERMOTOGA MARITIMA at 2.30 A resolution

Protein Overview: gi|24373461, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: