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Protein Overview: CLPP_SHEON

General Information:
Name(s) found: CLPP_SHEON [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • ATP-dependent Clp protease proteolytic subunit OS=Shewanella oneidensis (strain MR-1) GN=clpP PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 202 amino acids

    Gene Ontology:
    Cellular Component: endopeptidase Clp complex [ISSLink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHNASDIQSA LVPMVIEQTA KGERSFDIYS RLLKERIIFL VGQVEEHMAN LIVAQLLFLE  60
   61 SESPDKDIFL YINSPGGSVT AGMAIYDTMQ FIKPNVSTVC IGQAASMGAF LLAGGEKGKR 120
  121 FCLPNSRVMI HQPLGGFQGQ ASDIAIHAQE ILGIKNKLNQ MLADHTGQPL EVIERDTDRD 180
  181 NFMSATQAVE YGLVDAVMTK RG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..202] PSI-BLAST 71.045757 Clp protease, ClpP subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.46154163027498 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  0.939626895227199 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  0.764444938444292 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  0.621229080200493 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  0.620657548610719 bayes_pls_golite062009
  • hydrolase activity
    		•  0.534319520590169 bayes_pls_golite062009
  • binding
    		•  0.367666848528835 bayes_pls_golite062009
  • ligase activity
    		•  0.32092496884003 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle