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Protein Overview: gi|24347436, gi|...

General Information:
Name(s) found: gi|24373212 [NCBI NR]
gi|24347436 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24373212|ref|NP_717255.1| DNA polymerase III subunit alpha [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347436|gb|AAN54699.1|AE015610_3 DNA polymerase III, alpha subunit [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 1158 amino acids

    Gene Ontology:
    Cellular Component: DNA polymerase III complex [ISSLink to PubMed article]
    Biological Process: DNA replication [ISSLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDPRFVHLR VHSDFSMSDG VAKVKPILAQ VEAKGMAAVA LTDQNNLCGL VKFYGGCHGA  60
   61 GIKPIIGADF WMQVPGFEDE FCAVTIIAMD NEGYQNLTQI ISQAYLRGQV QGRVVIDQEW 120
  121 LITYNPGILL LSGGKEGDIG KALLKGNNTQ VESLCEFYQQ HFEGRYFLEL LRTGRPDEER 180
  181 YLHMAVGVAQ EKGIPVVATN QVVFLKPEDF EAHEIRVAIH DGFTLADPRR PKKYSEQQYL 240
  241 RSEDEMCELF ADIPAALANT VEIAKRCNVT IRLNEYFLPN FPTGDMSIED FLVDCSKKGL 300
  301 EERLAFLFPD PQVRAERRGE YDERLDVELK VINQMGFPGY FLIVMEFIQW GKDNGIPVGP 360
  361 GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMDR RDEVIDHVAE 420
  421 LYGREAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLIPPEPGMT LAKAFEVEPA 480
  481 LQESYDADED VKDLIDMCRK LEGVTRNAGK HAGGVVIAPT KITDFSPLYC DAEGKNPVTQ 540
  541 FDKNDVETAG LVKFDFLGLR TLTIVDWALE MINKVEVKNG RSPIRIEAIP LDDPASFRLL 600
  601 QRYETTAVFQ LESRGMKDLI KRLQPDCFED MIALVALFRP GPLQSGMVDN FIERKHGREE 660
  661 VSYPDSQYQH ESLKELLSPT YGIILYQEQV MQIAQVLSGY TLGGADMLRR AMGKKKPEEM 720
  721 AKQRSIFKEG AIKNGVDGEL SMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKTHFPP 780
  781 QFMAAVMSAD MDNTDKIVTL VDECERMGLT IIPPDVNKGL FKFTVDDDLR IVYGIGAIKG 840
  841 VGEGPVESIL EARKDGPFTD LFDFCARIDL KKLNKRVIEK LICAGALDAL GPHRASMMAT 900
  901 LPEAISAADQ HAKAEAIGQH DMFGLLNSDP EDSKQQFVEC TPWPDKIWLE GERETLGLYL 960
  961 TGHPINQYLK ELKHYTSGRL KDVHPTDRGK TVKAAGLVVA TRVMLTKRGS KMGLLTLDDK1020
 1021 SARLEVMLFT EAFEKFNHLL EKDRILICEG EVSFDDFAGG NRMTARNIID ISEARSHFAS1080
 1081 ALEIDLEASQ LTPSMLDSIE QAISPWRNGA VPVLINYSQA QAKGQFRLAE AWRVNPSDEL1140
 1141 VFALESLLGP HKVRIVFP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1158] PSI-BLAST 1000.0 No description for 2hpiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle